Strain Fitness in Shewanella loihica PV-4 around Shew_0374
Experiment: Phosphomycin 0.24 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.24 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 420,254 | + | Shew_0372 | 0.14 | +0.2 | |
| 420,343 | + | Shew_0372 | 0.34 | -0.1 | |
| 420,613 | + | +0.3 | |||
| 420,780 | + | Shew_0373 | 0.33 | -0.5 | |
| 420,886 | + | Shew_0373 | 0.59 | -1.4 | |
| 420,886 | + | Shew_0373 | 0.59 | -0.0 | |
| 421,058 | + | +0.7 | |||
| 421,559 | + | hslU | Shew_0374 | 0.33 | -2.3 |
| 421,793 | - | hslU | Shew_0374 | 0.51 | -1.7 |
| 422,142 | + | hslU | Shew_0374 | 0.77 | -2.8 |
| 422,150 | - | hslU | Shew_0374 | 0.77 | -4.2 |
| 422,748 | + | Shew_0375 | 0.46 | -1.5 | |
| 423,158 | + | +1.0 | |||
| 423,412 | - | -0.1 |
Or see this region's nucleotide sequence