Strain Fitness in Shewanella loihica PV-4 around Shew_0064

Experiment: Phosphomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.24 mg/ml
76,994	+		Shew_0063	0.66	+0.2
77,047	+		Shew_0063	0.68	-0.2
77,060	-		Shew_0063	0.68	+0.4
77,060	-		Shew_0063	0.68	+0.4
77,060	-		Shew_0063	0.68	+2.0
77,083	-		Shew_0063	0.69	+0.2
77,156	+		Shew_0063	0.72	+0.2
77,164	-		Shew_0063	0.72	+0.1
77,256	-		Shew_0063	0.75	-0.5
77,370	+		Shew_0063	0.79	+0.3
77,608	+		Shew_0063	0.88	-0.6
77,621	-		Shew_0063	0.88	+0.3
77,751	-				-0.4
77,794	-				+0.1
77,882	+				+0.7
77,928	+				+0.6
78,067	+		Shew_0064	0.15	-0.1
78,075	-		Shew_0064	0.17	+1.4
78,138	-		Shew_0064	0.28	-0.9
78,265	+		Shew_0064	0.50	+0.5
78,265	+		Shew_0064	0.50	-0.3
78,372	-		Shew_0064	0.69	+0.7
78,519	-				-0.9
78,568	-				-2.3
78,579	-				+0.1
78,712	+				-0.2
78,817	+		Shew_0065	0.20	-0.4
78,853	+		Shew_0065	0.24	-0.1
79,008	-		Shew_0065	0.39	-0.2
79,008	-		Shew_0065	0.39	-1.0
79,038	+		Shew_0065	0.42	-1.7
79,106	+		Shew_0065	0.49	-0.1
79,114	+		Shew_0065	0.50	-1.2
79,259	+		Shew_0065	0.65	+0.5
79,267	-		Shew_0065	0.65	-0.1
79,414	+		Shew_0065	0.80	-0.3
79,538	-				+0.3