Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3070

Experiment: D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
3,209,906	+		Ga0059261_3068	0.41	-0.2
3,209,906	+		Ga0059261_3068	0.41	-0.9
3,209,906	+		Ga0059261_3068	0.41	+0.3
3,209,906	+		Ga0059261_3068	0.41	-0.6
3,209,907	-		Ga0059261_3068	0.41	+0.3
3,209,946	-		Ga0059261_3068	0.45	-0.1
3,209,946	-		Ga0059261_3068	0.45	+1.2
3,210,002	+		Ga0059261_3068	0.51	+0.1
3,210,003	-		Ga0059261_3068	0.51	-0.8
3,210,003	-		Ga0059261_3068	0.51	-0.1
3,210,003	-		Ga0059261_3068	0.51	+1.0
3,210,020	+		Ga0059261_3068	0.53	+0.5
3,210,020	+		Ga0059261_3068	0.53	+0.5
3,210,020	+		Ga0059261_3068	0.53	+1.0
3,210,021	-		Ga0059261_3068	0.53	+0.7
3,210,021	-		Ga0059261_3068	0.53	+0.5
3,210,074	+		Ga0059261_3068	0.59	-0.3
3,210,074	+		Ga0059261_3068	0.59	+0.3
3,210,074	+		Ga0059261_3068	0.59	+0.2
3,210,074	+		Ga0059261_3068	0.59	-0.4
3,210,074	+		Ga0059261_3068	0.59	+0.6
3,210,075	-		Ga0059261_3068	0.59	-0.0
3,210,075	-		Ga0059261_3068	0.59	+0.1
3,210,075	-		Ga0059261_3068	0.59	+0.4
3,210,075	-		Ga0059261_3068	0.59	-2.8
3,210,137	+		Ga0059261_3068	0.66	+0.2
3,210,137	+		Ga0059261_3068	0.66	-0.1
3,210,137	+		Ga0059261_3068	0.66	+0.2
3,210,137	+		Ga0059261_3068	0.66	+1.6
3,210,137	+		Ga0059261_3068	0.66	+0.1
3,210,138	-		Ga0059261_3068	0.66	+0.0
3,210,138	-		Ga0059261_3068	0.66	-0.8
3,210,138	-		Ga0059261_3068	0.66	+0.8
3,210,138	-		Ga0059261_3068	0.66	-1.1
3,210,138	-		Ga0059261_3068	0.66	+0.5
3,210,138	-		Ga0059261_3068	0.66	-0.7
3,210,150	+		Ga0059261_3068	0.68	+0.0
3,210,150	+		Ga0059261_3068	0.68	-0.2
3,210,151	-		Ga0059261_3068	0.68	+0.0
3,210,151	-		Ga0059261_3068	0.68	+0.3
3,210,151	-		Ga0059261_3068	0.68	+0.5
3,210,167	+		Ga0059261_3068	0.70	+0.9
3,210,168	-		Ga0059261_3068	0.70	+0.7
3,210,168	-		Ga0059261_3068	0.70	+0.2
3,210,187	+		Ga0059261_3068	0.72	+1.1
3,210,187	+		Ga0059261_3068	0.72	+0.1
3,210,187	+		Ga0059261_3068	0.72	-0.2
3,210,187	+		Ga0059261_3068	0.72	-0.3
3,210,187	+		Ga0059261_3068	0.72	+0.3
3,210,187	+		Ga0059261_3068	0.72	+0.5
3,210,187	+		Ga0059261_3068	0.72	+1.1
3,210,188	-		Ga0059261_3068	0.72	-0.1
3,210,198	+		Ga0059261_3068	0.73	-0.2
3,210,198	+		Ga0059261_3068	0.73	+0.1
3,210,198	+		Ga0059261_3068	0.73	-0.2
3,210,199	-		Ga0059261_3068	0.73	+0.2
3,210,199	-		Ga0059261_3068	0.73	+0.2
3,210,199	-		Ga0059261_3068	0.73	+0.5
3,210,199	-		Ga0059261_3068	0.73	+0.8
3,210,199	-		Ga0059261_3068	0.73	+1.1
3,210,296	+		Ga0059261_3068	0.84	-0.3
3,210,296	+		Ga0059261_3068	0.84	-1.0
3,210,296	+		Ga0059261_3068	0.84	+0.5
3,210,296	+		Ga0059261_3068	0.84	-0.6
3,210,297	-		Ga0059261_3068	0.84	-1.5
3,210,323	+		Ga0059261_3068	0.87	+0.2
3,210,323	+		Ga0059261_3068	0.87	+0.1
3,210,323	+		Ga0059261_3068	0.87	+0.2
3,210,323	+		Ga0059261_3068	0.87	-1.4
3,210,323	+		Ga0059261_3068	0.87	-1.7
3,210,323	+		Ga0059261_3068	0.87	-0.2
3,210,323	+		Ga0059261_3068	0.87	+1.4
3,210,324	-		Ga0059261_3068	0.87	+0.8
3,210,324	-				-1.6
3,210,324	-		Ga0059261_3068	0.87	+0.1
3,210,324	-		Ga0059261_3068	0.87	+0.3
3,210,331	+		Ga0059261_3068	0.88	-0.4
3,210,331	+		Ga0059261_3068	0.88	-0.3
3,210,331	+		Ga0059261_3068	0.88	-0.0
3,210,331	+		Ga0059261_3068	0.88	-0.3
3,210,331	+		Ga0059261_3068	0.88	+0.7
3,210,331	+		Ga0059261_3068	0.88	+0.8
3,210,331	+		Ga0059261_3068	0.88	-0.7
3,210,332	-		Ga0059261_3068	0.88	-0.2
3,210,332	-		Ga0059261_3068	0.88	+0.6
3,210,440	+				+0.6
3,210,440	+				-0.3
3,210,440	+				-1.0
3,210,441	-				+1.0
3,210,503	+				+0.9
3,210,504	-				-0.4
3,210,504	-				+0.4
3,210,504	-				+1.3
3,210,692	+				+0.3
3,210,724	+				+0.2
3,210,724	+				-0.0
3,210,724	+				-0.5
3,210,724	+				-0.8
3,210,725	-				-0.4
3,210,756	+				+0.5
3,210,756	+				-0.6
3,210,756	+				+0.0
3,210,756	+				-1.9
3,210,757	-				+0.7
3,210,757	-				+0.3
3,210,757	-				+0.5
3,210,757	-				-0.3
3,210,757	-				+0.6
3,210,757	-				+0.5
3,210,921	+				-0.8
3,211,002	+				+1.1
3,211,002	+				+0.1
3,211,002	+				+0.6
3,211,002	+				-0.2
3,211,003	-				-0.6
3,211,003	-				-0.3
3,211,008	+				-0.2
3,211,008	+				+0.4
3,211,009	-				-0.2
3,211,009	-				-1.4
3,211,009	-				-0.6
3,211,017	+				+0.2
3,211,017	+				-0.3
3,211,017	+				+0.1
3,211,137	+		Ga0059261_3070	0.16	-0.8
3,211,137	+		Ga0059261_3070	0.16	-0.7
3,211,137	+		Ga0059261_3070	0.16	+0.9
3,211,137	+		Ga0059261_3070	0.16	+0.0
3,211,137	+		Ga0059261_3070	0.16	+0.4
3,211,137	+		Ga0059261_3070	0.16	+0.7
3,211,137	+		Ga0059261_3070	0.16	-0.5
3,211,137	+				+0.2
3,211,137	+		Ga0059261_3070	0.16	-0.7
3,211,137	+		Ga0059261_3070	0.16	+0.4
3,211,137	+		Ga0059261_3070	0.16	+0.2
3,211,137	+		Ga0059261_3070	0.16	-2.3
3,211,137	+		Ga0059261_3070	0.16	+0.5
3,211,137	+		Ga0059261_3070	0.16	-0.7
3,211,138	-		Ga0059261_3070	0.16	+0.2
3,211,138	-		Ga0059261_3070	0.16	-0.1
3,211,138	-		Ga0059261_3070	0.16	+0.4
3,211,138	-		Ga0059261_3070	0.16	+0.1
3,211,138	-		Ga0059261_3070	0.16	+0.1
3,211,138	-		Ga0059261_3070	0.16	+0.4
3,211,138	-		Ga0059261_3070	0.16	+0.5
3,211,138	-		Ga0059261_3070	0.16	+1.0
3,211,138	-		Ga0059261_3070	0.16	-0.2
3,211,138	-		Ga0059261_3070	0.16	+0.1
3,211,189	-		Ga0059261_3070	0.18	+0.3
3,211,189	-		Ga0059261_3070	0.18	+0.0
3,211,230	+		Ga0059261_3070	0.20	+0.6
3,211,230	+		Ga0059261_3070	0.20	+0.2
3,211,230	+		Ga0059261_3070	0.20	-2.0
3,211,231	-		Ga0059261_3070	0.20	+0.5
3,211,443	+		Ga0059261_3070	0.31	-0.1
3,211,444	-		Ga0059261_3070	0.31	-0.1
3,211,444	-		Ga0059261_3070	0.31	-0.7
3,211,444	-		Ga0059261_3070	0.31	-0.2
3,211,595	+		Ga0059261_3070	0.38	-0.4
3,211,596	-		Ga0059261_3070	0.38	-0.1
3,211,596	-		Ga0059261_3070	0.38	+1.2
3,211,602	+		Ga0059261_3070	0.39	-0.6
3,211,602	+		Ga0059261_3070	0.39	-0.1
3,211,602	+		Ga0059261_3070	0.39	+0.3
3,211,602	+		Ga0059261_3070	0.39	+0.6
3,211,603	-		Ga0059261_3070	0.39	-0.5
3,211,603	-		Ga0059261_3070	0.39	-0.5
3,211,603	-		Ga0059261_3070	0.39	+0.4
3,211,603	-		Ga0059261_3070	0.39	+0.4
3,211,827	+		Ga0059261_3070	0.50	+0.5
3,211,827	+		Ga0059261_3070	0.50	-0.2
3,211,827	+		Ga0059261_3070	0.50	+0.4
3,211,827	+		Ga0059261_3070	0.50	+0.3
3,211,827	+		Ga0059261_3070	0.50	-1.4
3,211,828	-		Ga0059261_3070	0.50	+0.3
3,211,828	-		Ga0059261_3070	0.50	+0.3
3,211,828	-		Ga0059261_3070	0.50	-0.2
3,211,828	-		Ga0059261_3070	0.50	+1.7
3,211,828	-		Ga0059261_3070	0.50	+0.7
3,211,914	+		Ga0059261_3070	0.54	+0.4
3,211,914	+		Ga0059261_3070	0.54	-0.8
3,211,914	+		Ga0059261_3070	0.54	+0.6
3,211,914	+		Ga0059261_3070	0.54	-0.2
3,211,915	-		Ga0059261_3070	0.54	+0.2
3,211,915	-		Ga0059261_3070	0.54	+0.1
3,212,021	+		Ga0059261_3070	0.59	-0.8
3,212,021	+		Ga0059261_3070	0.59	+0.2
3,212,021	+		Ga0059261_3070	0.59	-0.2
3,212,021	+		Ga0059261_3070	0.59	+1.5
3,212,022	-		Ga0059261_3070	0.59	+0.2
3,212,173	-		Ga0059261_3070	0.67	+0.2
3,212,173	-		Ga0059261_3070	0.67	+1.1
3,212,173	-		Ga0059261_3070	0.67	+0.3
3,212,253	-		Ga0059261_3070	0.71	-0.1
3,212,301	+		Ga0059261_3070	0.73	+0.3
3,212,301	+		Ga0059261_3070	0.73	-1.2
3,212,301	+		Ga0059261_3070	0.73	+1.2
3,212,301	+		Ga0059261_3070	0.73	-0.6
3,212,302	-		Ga0059261_3070	0.73	-0.4
3,212,302	-		Ga0059261_3070	0.73	+1.2
3,212,463	+		Ga0059261_3070	0.81	+0.4
3,212,477	+		Ga0059261_3070	0.82	-0.1
3,212,478	-		Ga0059261_3070	0.82	+0.1
3,212,478	-		Ga0059261_3070	0.82	-0.0
3,212,478	-		Ga0059261_3070	0.82	+1.0
3,212,478	-		Ga0059261_3070	0.82	-0.1
3,212,478	-		Ga0059261_3070	0.82	+0.0
3,212,478	-		Ga0059261_3070	0.82	+1.1
3,212,526	+		Ga0059261_3070	0.84	-0.9
3,212,526	+		Ga0059261_3070	0.84	-0.2
3,212,527	-		Ga0059261_3070	0.84	+0.7
3,212,527	-		Ga0059261_3070	0.84	-0.1
3,212,527	-		Ga0059261_3070	0.84	-0.1
3,212,796	+				-0.5
3,212,796	+				+0.5
3,212,797	-				+1.1
3,212,867	+				+0.5
3,212,867	+				+0.7
3,212,867	+				-0.6
3,212,867	+				+0.1
3,212,867	+				+1.3
3,212,867	+				-0.1
3,212,867	+				+0.2
3,212,867	+				+1.2
3,212,867	+				-0.4
3,212,867	+				+0.1
3,212,867	+				+0.6
3,212,867	+				-0.3
3,212,867	+				-0.2
3,212,867	+				-0.6
3,212,867	+				+0.5
3,212,868	-				-0.3
3,212,868	-				+0.1
3,212,868	-				+0.3
3,212,868	-				-0.3
3,212,868	-				+0.4
3,212,868	-				-0.8
3,212,868	-				+1.1
3,212,868	-				+0.1
3,212,868	-				-0.1
3,212,869	+				+0.6
3,212,869	+				-1.3
3,212,870	-				-1.1
3,212,870	-				-0.3
3,212,870	-				-0.5
3,212,870	-				+0.2
3,212,870	-				-0.4
3,213,092	+		Ga0059261_3071	0.61	+0.5
3,213,318	+				-0.3
3,213,318	+				+0.5
3,213,319	-				-0.2
3,213,348	-		Ga0059261_3072	0.10	-0.2
3,213,348	-		Ga0059261_3072	0.10	-0.2
3,213,362	+		Ga0059261_3072	0.12	-1.3
3,213,362	+		Ga0059261_3072	0.12	+1.8
3,213,362	+		Ga0059261_3072	0.12	-2.0
3,213,362	+		Ga0059261_3072	0.12	-1.8
3,213,362	+		Ga0059261_3072	0.12	-1.2
3,213,363	-		Ga0059261_3072	0.12	+0.6
3,213,363	-		Ga0059261_3072	0.12	+0.2
3,213,363	-		Ga0059261_3072	0.12	-0.2
3,213,453	+		Ga0059261_3072	0.21	-1.0
3,213,454	-		Ga0059261_3072	0.21	+0.3
3,213,481	-		Ga0059261_3072	0.23	+1.3
3,213,622	+		Ga0059261_3072	0.38	-0.2
3,213,622	+		Ga0059261_3072	0.38	+0.1
3,213,622	+		Ga0059261_3072	0.38	+0.8
3,213,622	+		Ga0059261_3072	0.38	+0.1
3,213,622	+		Ga0059261_3072	0.38	+0.3
3,213,623	-		Ga0059261_3072	0.38	+2.9
3,213,623	-		Ga0059261_3072	0.38	-0.2
3,213,623	-		Ga0059261_3072	0.38	+0.3
3,213,623	-		Ga0059261_3072	0.38	+0.6
3,213,637	+		Ga0059261_3072	0.39	-0.9
3,213,637	+		Ga0059261_3072	0.39	+1.1
3,213,637	+		Ga0059261_3072	0.39	+1.3
3,213,637	+		Ga0059261_3072	0.39	+0.0
3,213,638	-		Ga0059261_3072	0.39	-0.1
3,213,638	-		Ga0059261_3072	0.39	+0.7
3,213,782	+		Ga0059261_3072	0.54	-0.5
3,213,782	+		Ga0059261_3072	0.54	-0.9
3,213,783	-		Ga0059261_3072	0.54	+0.5