Experiment: D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0813 and Ga0059261_0814 overlap by 1 nucleotides Ga0059261_0814 and Ga0059261_0815 are separated by 7 nucleotides Ga0059261_0815 and Ga0059261_0816 are separated by 161 nucleotides Ga0059261_0816 and Ga0059261_0817 are separated by 43 nucleotides
Ga0059261_0813: Ga0059261_0813 - hypothetical protein, at 855,433 to 855,915
_0813
Ga0059261_0814: Ga0059261_0814 - hypothetical protein, at 855,915 to 856,631
_0814
Ga0059261_0815: Ga0059261_0815 - Uncharacterized protein involved in tellurite resistance, at 856,639 to 857,847
_0815
Ga0059261_0816: Ga0059261_0816 - hypothetical protein, at 858,009 to 858,179
_0816
Ga0059261_0817: Ga0059261_0817 - GTP-binding protein TypA/BipA, at 858,223 to 860,037
_0817
Position (kb) 856
857
858 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 855.713 kb on + strand, within Ga0059261_0813 at 855.713 kb on + strand, within Ga0059261_0813 at 855.714 kb on - strand, within Ga0059261_0813 at 855.714 kb on - strand at 855.729 kb on + strand, within Ga0059261_0813 at 855.730 kb on - strand, within Ga0059261_0813 at 855.764 kb on + strand, within Ga0059261_0813 at 855.764 kb on + strand, within Ga0059261_0813 at 855.764 kb on + strand, within Ga0059261_0813 at 855.765 kb on - strand, within Ga0059261_0813 at 855.842 kb on + strand, within Ga0059261_0813 at 855.842 kb on + strand at 855.946 kb on + strand at 855.946 kb on + strand at 855.947 kb on - strand at 855.947 kb on - strand at 855.947 kb on - strand at 855.947 kb on - strand at 855.961 kb on + strand at 856.017 kb on - strand, within Ga0059261_0814 at 856.121 kb on - strand, within Ga0059261_0814 at 856.413 kb on + strand, within Ga0059261_0814 at 856.413 kb on + strand, within Ga0059261_0814 at 856.413 kb on + strand, within Ga0059261_0814 at 856.414 kb on - strand, within Ga0059261_0814 at 856.414 kb on - strand, within Ga0059261_0814 at 856.564 kb on + strand at 856.565 kb on - strand at 856.640 kb on + strand at 856.641 kb on - strand at 856.713 kb on + strand at 856.713 kb on + strand at 856.714 kb on - strand at 856.715 kb on + strand at 856.715 kb on + strand at 856.715 kb on + strand at 856.715 kb on + strand at 856.715 kb on + strand at 856.715 kb on + strand at 856.716 kb on - strand at 856.716 kb on - strand at 856.716 kb on - strand at 856.767 kb on + strand, within Ga0059261_0815 at 856.767 kb on + strand, within Ga0059261_0815 at 856.767 kb on + strand, within Ga0059261_0815 at 856.767 kb on + strand, within Ga0059261_0815 at 856.768 kb on - strand, within Ga0059261_0815 at 856.768 kb on - strand, within Ga0059261_0815 at 856.817 kb on + strand, within Ga0059261_0815 at 856.817 kb on + strand, within Ga0059261_0815 at 856.817 kb on + strand, within Ga0059261_0815 at 856.817 kb on + strand, within Ga0059261_0815 at 856.817 kb on + strand, within Ga0059261_0815 at 856.817 kb on + strand, within Ga0059261_0815 at 856.818 kb on - strand, within Ga0059261_0815 at 856.818 kb on - strand, within Ga0059261_0815 at 856.818 kb on - strand, within Ga0059261_0815 at 857.079 kb on - strand, within Ga0059261_0815 at 857.102 kb on + strand, within Ga0059261_0815 at 857.102 kb on + strand, within Ga0059261_0815 at 857.102 kb on + strand, within Ga0059261_0815 at 857.158 kb on - strand, within Ga0059261_0815 at 857.159 kb on + strand, within Ga0059261_0815 at 857.159 kb on + strand, within Ga0059261_0815 at 857.159 kb on + strand, within Ga0059261_0815 at 857.159 kb on + strand, within Ga0059261_0815 at 857.159 kb on + strand, within Ga0059261_0815 at 857.159 kb on + strand, within Ga0059261_0815 at 857.159 kb on + strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.160 kb on - strand, within Ga0059261_0815 at 857.261 kb on + strand, within Ga0059261_0815 at 857.261 kb on + strand, within Ga0059261_0815 at 857.261 kb on + strand, within Ga0059261_0815 at 857.261 kb on + strand, within Ga0059261_0815 at 857.261 kb on + strand, within Ga0059261_0815 at 857.261 kb on + strand, within Ga0059261_0815 at 857.261 kb on + strand at 857.261 kb on + strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.262 kb on - strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.400 kb on + strand, within Ga0059261_0815 at 857.401 kb on - strand, within Ga0059261_0815 at 857.401 kb on - strand, within Ga0059261_0815 at 857.401 kb on - strand, within Ga0059261_0815 at 857.401 kb on - strand, within Ga0059261_0815 at 857.401 kb on - strand, within Ga0059261_0815 at 857.401 kb on - strand, within Ga0059261_0815 at 857.401 kb on - strand, within Ga0059261_0815 at 857.402 kb on + strand, within Ga0059261_0815 at 857.402 kb on + strand, within Ga0059261_0815 at 857.402 kb on + strand, within Ga0059261_0815 at 857.402 kb on + strand, within Ga0059261_0815 at 857.402 kb on + strand, within Ga0059261_0815 at 857.402 kb on + strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.403 kb on - strand, within Ga0059261_0815 at 857.414 kb on + strand, within Ga0059261_0815 at 857.415 kb on - strand, within Ga0059261_0815 at 857.908 kb on - strand at 857.932 kb on + strand at 857.932 kb on + strand at 857.932 kb on + strand at 857.932 kb on + strand at 857.933 kb on - strand at 857.933 kb on - strand at 857.982 kb on + strand at 857.983 kb on - strand at 857.983 kb on - strand at 857.983 kb on - strand at 857.983 kb on - strand at 857.983 kb on - strand at 857.983 kb on - strand at 857.983 kb on - strand at 857.983 kb on - strand at 857.983 kb on - strand at 857.987 kb on + strand at 857.987 kb on + strand at 857.987 kb on + strand at 857.988 kb on - strand at 857.988 kb on - strand at 857.988 kb on - strand at 857.988 kb on - strand at 857.997 kb on - strand at 858.152 kb on - strand, within Ga0059261_0816 at 858.152 kb on - strand, within Ga0059261_0816 at 858.152 kb on - strand, within Ga0059261_0816 at 858.477 kb on + strand, within Ga0059261_0817 at 858.478 kb on - strand, within Ga0059261_0817 at 858.706 kb on + strand, within Ga0059261_0817 at 858.706 kb on + strand, within Ga0059261_0817
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) and 0.25mM L-Methionine; no added vitamins remove 855,713 + Ga0059261_0813 0.58 +0.7 855,713 + Ga0059261_0813 0.58 +0.2 855,714 - Ga0059261_0813 0.58 -0.7 855,714 - -0.0 855,729 + Ga0059261_0813 0.61 +0.2 855,730 - Ga0059261_0813 0.61 +0.7 855,764 + Ga0059261_0813 0.69 +2.2 855,764 + Ga0059261_0813 0.69 +1.5 855,764 + Ga0059261_0813 0.69 -0.8 855,765 - Ga0059261_0813 0.69 +0.3 855,842 + Ga0059261_0813 0.85 +1.8 855,842 + -1.2 855,946 + -0.2 855,946 + -1.4 855,947 - +0.4 855,947 - -0.4 855,947 - -1.0 855,947 - -0.6 855,961 + -1.1 856,017 - Ga0059261_0814 0.14 -0.9 856,121 - Ga0059261_0814 0.29 -0.5 856,413 + Ga0059261_0814 0.69 -3.2 856,413 + Ga0059261_0814 0.69 -0.3 856,413 + Ga0059261_0814 0.69 -0.8 856,414 - Ga0059261_0814 0.70 -1.6 856,414 - Ga0059261_0814 0.70 -0.1 856,564 + -1.2 856,565 - -0.9 856,640 + -1.2 856,641 - -0.8 856,713 + -1.0 856,713 + -2.0 856,714 - -1.0 856,715 + -0.7 856,715 + -0.5 856,715 + -0.7 856,715 + -1.3 856,715 + -0.2 856,715 + +0.2 856,716 - -0.4 856,716 - -0.6 856,716 - +0.1 856,767 + Ga0059261_0815 0.11 -1.5 856,767 + Ga0059261_0815 0.11 -1.6 856,767 + Ga0059261_0815 0.11 -1.2 856,767 + Ga0059261_0815 0.11 -0.3 856,768 - Ga0059261_0815 0.11 -2.2 856,768 - Ga0059261_0815 0.11 -1.5 856,817 + Ga0059261_0815 0.15 -1.2 856,817 + Ga0059261_0815 0.15 -1.9 856,817 + Ga0059261_0815 0.15 +0.0 856,817 + Ga0059261_0815 0.15 -0.1 856,817 + Ga0059261_0815 0.15 -1.5 856,817 + Ga0059261_0815 0.15 -2.8 856,818 - Ga0059261_0815 0.15 -1.7 856,818 - Ga0059261_0815 0.15 +0.6 856,818 - Ga0059261_0815 0.15 -1.1 857,079 - Ga0059261_0815 0.36 +0.0 857,102 + Ga0059261_0815 0.38 -0.6 857,102 + Ga0059261_0815 0.38 -0.8 857,102 + Ga0059261_0815 0.38 -0.3 857,158 - Ga0059261_0815 0.43 -0.6 857,159 + Ga0059261_0815 0.43 +0.3 857,159 + Ga0059261_0815 0.43 -0.6 857,159 + Ga0059261_0815 0.43 +0.1 857,159 + Ga0059261_0815 0.43 -1.6 857,159 + Ga0059261_0815 0.43 -3.2 857,159 + Ga0059261_0815 0.43 -0.2 857,159 + Ga0059261_0815 0.43 -1.4 857,160 - Ga0059261_0815 0.43 -1.4 857,160 - Ga0059261_0815 0.43 +1.1 857,160 - Ga0059261_0815 0.43 -0.3 857,160 - Ga0059261_0815 0.43 -1.1 857,160 - Ga0059261_0815 0.43 -0.9 857,160 - Ga0059261_0815 0.43 -0.6 857,160 - Ga0059261_0815 0.43 -0.5 857,160 - Ga0059261_0815 0.43 -0.4 857,160 - Ga0059261_0815 0.43 +0.1 857,261 + Ga0059261_0815 0.51 +0.2 857,261 + Ga0059261_0815 0.51 +0.8 857,261 + Ga0059261_0815 0.51 -0.6 857,261 + Ga0059261_0815 0.51 -1.5 857,261 + Ga0059261_0815 0.51 -1.2 857,261 + Ga0059261_0815 0.51 -1.9 857,261 + -1.1 857,261 + Ga0059261_0815 0.51 -0.3 857,262 - Ga0059261_0815 0.52 +0.7 857,262 - Ga0059261_0815 0.52 +1.0 857,262 - Ga0059261_0815 0.52 -1.6 857,262 - Ga0059261_0815 0.52 -0.2 857,262 - Ga0059261_0815 0.52 -0.3 857,262 - Ga0059261_0815 0.52 -0.5 857,262 - Ga0059261_0815 0.52 +1.3 857,262 - Ga0059261_0815 0.52 -0.5 857,262 - Ga0059261_0815 0.52 -0.3 857,262 - Ga0059261_0815 0.52 -0.9 857,400 + Ga0059261_0815 0.63 -0.1 857,400 + Ga0059261_0815 0.63 -2.0 857,400 + Ga0059261_0815 0.63 -0.1 857,400 + Ga0059261_0815 0.63 -1.3 857,400 + Ga0059261_0815 0.63 -1.1 857,400 + Ga0059261_0815 0.63 -0.3 857,400 + Ga0059261_0815 0.63 -1.5 857,400 + Ga0059261_0815 0.63 -3.0 857,400 + Ga0059261_0815 0.63 -1.2 857,400 + Ga0059261_0815 0.63 -1.8 857,400 + Ga0059261_0815 0.63 +0.0 857,401 - Ga0059261_0815 0.63 -3.5 857,401 - Ga0059261_0815 0.63 -0.0 857,401 - Ga0059261_0815 0.63 -1.3 857,401 - Ga0059261_0815 0.63 -1.4 857,401 - Ga0059261_0815 0.63 -1.8 857,401 - Ga0059261_0815 0.63 +0.1 857,401 - Ga0059261_0815 0.63 -1.0 857,402 + Ga0059261_0815 0.63 -1.2 857,402 + Ga0059261_0815 0.63 -1.9 857,402 + Ga0059261_0815 0.63 -1.7 857,402 + Ga0059261_0815 0.63 -1.0 857,402 + Ga0059261_0815 0.63 -2.1 857,402 + Ga0059261_0815 0.63 -3.5 857,403 - Ga0059261_0815 0.63 -0.7 857,403 - Ga0059261_0815 0.63 +0.2 857,403 - Ga0059261_0815 0.63 -0.8 857,403 - Ga0059261_0815 0.63 -1.7 857,403 - Ga0059261_0815 0.63 -2.6 857,403 - Ga0059261_0815 0.63 -1.0 857,403 - Ga0059261_0815 0.63 -1.3 857,403 - Ga0059261_0815 0.63 -0.0 857,403 - Ga0059261_0815 0.63 -1.7 857,403 - Ga0059261_0815 0.63 -0.2 857,414 + Ga0059261_0815 0.64 -1.0 857,415 - Ga0059261_0815 0.64 -0.5 857,908 - +0.3 857,932 + +0.4 857,932 + -0.7 857,932 + -0.3 857,932 + -2.5 857,933 - +0.3 857,933 - +0.9 857,982 + +0.3 857,983 - +1.1 857,983 - +0.9 857,983 - +0.4 857,983 - -0.6 857,983 - -0.6 857,983 - +0.1 857,983 - -0.7 857,983 - -0.0 857,983 - -1.8 857,987 + -0.5 857,987 + +0.3 857,987 + +0.1 857,988 - +1.0 857,988 - -0.4 857,988 - -0.9 857,988 - +1.0 857,997 - -0.0 858,152 - Ga0059261_0816 0.84 +0.6 858,152 - Ga0059261_0816 0.84 +0.1 858,152 - Ga0059261_0816 0.84 -0.3 858,477 + Ga0059261_0817 0.14 -2.2 858,478 - Ga0059261_0817 0.14 -1.8 858,706 + Ga0059261_0817 0.27 -1.9 858,706 + Ga0059261_0817 0.27 -1.9
Or see this region's nucleotide sequence