Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01915 and BWI76_RS01920 are separated by 145 nucleotides BWI76_RS01920 and BWI76_RS01925 are separated by 214 nucleotides
BWI76_RS01915: BWI76_RS01915 - replicative DNA helicase, at 389,441 to 390,856
_RS01915
BWI76_RS01920: BWI76_RS01920 - alanine racemase, at 391,002 to 392,081
_RS01920
BWI76_RS01925: BWI76_RS01925 - aromatic amino acid aminotransferase, at 392,296 to 393,489
_RS01925
Position (kb) 391
392
393 Strain fitness (log2 ratio) -1
0
1 at 390.894 kb on + strand at 390.897 kb on - strand at 391.119 kb on - strand, within BWI76_RS01920 at 391.131 kb on - strand, within BWI76_RS01920 at 391.148 kb on + strand, within BWI76_RS01920 at 391.156 kb on - strand, within BWI76_RS01920 at 391.188 kb on + strand, within BWI76_RS01920 at 391.301 kb on - strand, within BWI76_RS01920 at 391.301 kb on - strand, within BWI76_RS01920 at 391.417 kb on + strand, within BWI76_RS01920 at 391.429 kb on + strand, within BWI76_RS01920 at 391.439 kb on + strand, within BWI76_RS01920 at 391.439 kb on + strand, within BWI76_RS01920 at 391.447 kb on - strand, within BWI76_RS01920 at 391.555 kb on + strand, within BWI76_RS01920 at 391.590 kb on + strand, within BWI76_RS01920 at 391.830 kb on + strand, within BWI76_RS01920 at 392.257 kb on - strand at 392.267 kb on - strand at 392.508 kb on + strand, within BWI76_RS01925 at 392.563 kb on - strand, within BWI76_RS01925 at 392.596 kb on - strand, within BWI76_RS01925 at 392.840 kb on + strand, within BWI76_RS01925 at 392.860 kb on + strand, within BWI76_RS01925 at 392.988 kb on - strand, within BWI76_RS01925
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 390,894 + -0.4 390,897 - -1.4 391,119 - BWI76_RS01920 0.11 +0.3 391,131 - BWI76_RS01920 0.12 +0.0 391,148 + BWI76_RS01920 0.14 -0.3 391,156 - BWI76_RS01920 0.14 -0.4 391,188 + BWI76_RS01920 0.17 +0.2 391,301 - BWI76_RS01920 0.28 +1.5 391,301 - BWI76_RS01920 0.28 +0.4 391,417 + BWI76_RS01920 0.38 -0.1 391,429 + BWI76_RS01920 0.40 -0.8 391,439 + BWI76_RS01920 0.40 -0.2 391,439 + BWI76_RS01920 0.40 -0.1 391,447 - BWI76_RS01920 0.41 -1.4 391,555 + BWI76_RS01920 0.51 +0.4 391,590 + BWI76_RS01920 0.54 +0.7 391,830 + BWI76_RS01920 0.77 -0.1 392,257 - -0.3 392,267 - +0.3 392,508 + BWI76_RS01925 0.18 +0.2 392,563 - BWI76_RS01925 0.22 +0.2 392,596 - BWI76_RS01925 0.25 +0.4 392,840 + BWI76_RS01925 0.46 -0.2 392,860 + BWI76_RS01925 0.47 +0.0 392,988 - BWI76_RS01925 0.58 -0.3
Or see this region's nucleotide sequence