Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26765 and BPHYT_RS26770 are separated by 195 nucleotides BPHYT_RS26770 and BPHYT_RS26775 are separated by 9 nucleotides BPHYT_RS26775 and BPHYT_RS26780 are separated by 10 nucleotides
BPHYT_RS26765: BPHYT_RS26765 - LuxR family transcriptional regulator, at 1,574,684 to 1,575,502
_RS26765
BPHYT_RS26770: BPHYT_RS26770 - histidine kinase, at 1,575,698 to 1,576,825
_RS26770
BPHYT_RS26775: BPHYT_RS26775 - chemotaxis protein CheB, at 1,576,835 to 1,577,449
_RS26775
BPHYT_RS26780: BPHYT_RS26780 - chemotaxis protein CheR, at 1,577,460 to 1,578,305
_RS26780
Position (kb) 1575
1576
1577 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1574.766 kb on + strand, within BPHYT_RS26765 at 1574.767 kb on - strand, within BPHYT_RS26765 at 1574.770 kb on + strand, within BPHYT_RS26765 at 1574.770 kb on + strand, within BPHYT_RS26765 at 1574.770 kb on + strand, within BPHYT_RS26765 at 1575.143 kb on + strand, within BPHYT_RS26765 at 1575.238 kb on - strand, within BPHYT_RS26765 at 1575.700 kb on - strand at 1575.700 kb on - strand at 1575.893 kb on - strand, within BPHYT_RS26770 at 1576.079 kb on - strand, within BPHYT_RS26770 at 1576.244 kb on - strand, within BPHYT_RS26770 at 1576.887 kb on + strand at 1577.182 kb on + strand, within BPHYT_RS26775 at 1577.461 kb on + strand at 1577.462 kb on - strand at 1577.512 kb on + strand at 1577.623 kb on + strand, within BPHYT_RS26780 at 1577.743 kb on + strand, within BPHYT_RS26780 at 1577.794 kb on + strand, within BPHYT_RS26780
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 1,574,766 + BPHYT_RS26765 0.10 +1.3 1,574,767 - BPHYT_RS26765 0.10 -0.0 1,574,770 + BPHYT_RS26765 0.11 +0.8 1,574,770 + BPHYT_RS26765 0.11 +1.4 1,574,770 + BPHYT_RS26765 0.11 +1.8 1,575,143 + BPHYT_RS26765 0.56 -0.3 1,575,238 - BPHYT_RS26765 0.68 -0.7 1,575,700 - -0.3 1,575,700 - -1.8 1,575,893 - BPHYT_RS26770 0.17 -0.2 1,576,079 - BPHYT_RS26770 0.34 +0.2 1,576,244 - BPHYT_RS26770 0.48 +1.3 1,576,887 + -1.1 1,577,182 + BPHYT_RS26775 0.56 -3.6 1,577,461 + -0.1 1,577,462 - +1.3 1,577,512 + -0.0 1,577,623 + BPHYT_RS26780 0.19 -1.3 1,577,743 + BPHYT_RS26780 0.33 +0.1 1,577,794 + BPHYT_RS26780 0.39 +0.6
Or see this region's nucleotide sequence