Experiment: 2-Deoxy-D-ribonic lithium salt (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS06720 and BPHYT_RS06725 are separated by 35 nucleotides BPHYT_RS06725 and BPHYT_RS06730 overlap by 4 nucleotides BPHYT_RS06730 and BPHYT_RS06735 are separated by 90 nucleotides
BPHYT_RS06720: BPHYT_RS06720 - acyl-CoA dehydrogenase, at 1,522,274 to 1,523,401
_RS06720
BPHYT_RS06725: BPHYT_RS06725 - MaoC family dehydratase, at 1,523,437 to 1,523,895
_RS06725
BPHYT_RS06730: BPHYT_RS06730 - MaoC family dehydratase, at 1,523,892 to 1,524,368
_RS06730
BPHYT_RS06735: BPHYT_RS06735 - glutathione S-transferase, at 1,524,459 to 1,525,160
_RS06735
Position (kb) 1523
1524 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1522.532 kb on + strand, within BPHYT_RS06720 at 1522.668 kb on - strand, within BPHYT_RS06720 at 1522.851 kb on - strand, within BPHYT_RS06720 at 1522.952 kb on - strand, within BPHYT_RS06720 at 1522.952 kb on - strand, within BPHYT_RS06720 at 1522.974 kb on + strand, within BPHYT_RS06720 at 1522.974 kb on + strand, within BPHYT_RS06720 at 1522.974 kb on + strand, within BPHYT_RS06720 at 1522.974 kb on + strand, within BPHYT_RS06720 at 1522.974 kb on + strand, within BPHYT_RS06720 at 1523.030 kb on + strand, within BPHYT_RS06720 at 1523.030 kb on + strand, within BPHYT_RS06720 at 1523.138 kb on + strand, within BPHYT_RS06720 at 1523.139 kb on - strand, within BPHYT_RS06720 at 1523.317 kb on + strand at 1523.317 kb on + strand at 1523.317 kb on + strand at 1523.318 kb on - strand at 1523.318 kb on - strand at 1523.613 kb on + strand, within BPHYT_RS06725 at 1523.614 kb on - strand, within BPHYT_RS06725 at 1523.715 kb on - strand, within BPHYT_RS06725 at 1524.134 kb on - strand, within BPHYT_RS06730 at 1524.177 kb on + strand, within BPHYT_RS06730 at 1524.178 kb on - strand, within BPHYT_RS06730 at 1524.436 kb on + strand at 1524.437 kb on - strand at 1524.677 kb on + strand, within BPHYT_RS06735 at 1524.677 kb on + strand, within BPHYT_RS06735 at 1524.677 kb on + strand, within BPHYT_RS06735 at 1524.679 kb on + strand, within BPHYT_RS06735 at 1524.679 kb on + strand, within BPHYT_RS06735 at 1524.680 kb on - strand, within BPHYT_RS06735 at 1524.680 kb on - strand, within BPHYT_RS06735 at 1524.698 kb on - strand, within BPHYT_RS06735 at 1524.773 kb on - strand, within BPHYT_RS06735
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt (C) remove 1,522,532 + BPHYT_RS06720 0.23 +1.5 1,522,668 - BPHYT_RS06720 0.35 -0.7 1,522,851 - BPHYT_RS06720 0.51 -0.6 1,522,952 - BPHYT_RS06720 0.60 -0.1 1,522,952 - BPHYT_RS06720 0.60 +0.5 1,522,974 + BPHYT_RS06720 0.62 -1.1 1,522,974 + BPHYT_RS06720 0.62 -0.6 1,522,974 + BPHYT_RS06720 0.62 +1.5 1,522,974 + BPHYT_RS06720 0.62 +0.8 1,522,974 + BPHYT_RS06720 0.62 +0.0 1,523,030 + BPHYT_RS06720 0.67 +0.3 1,523,030 + BPHYT_RS06720 0.67 -2.4 1,523,138 + BPHYT_RS06720 0.77 +0.3 1,523,139 - BPHYT_RS06720 0.77 +0.6 1,523,317 + +0.9 1,523,317 + -1.9 1,523,317 + -2.7 1,523,318 - -0.6 1,523,318 - -0.0 1,523,613 + BPHYT_RS06725 0.38 -2.2 1,523,614 - BPHYT_RS06725 0.39 -1.9 1,523,715 - BPHYT_RS06725 0.61 -1.0 1,524,134 - BPHYT_RS06730 0.51 +0.9 1,524,177 + BPHYT_RS06730 0.60 +0.9 1,524,178 - BPHYT_RS06730 0.60 +0.5 1,524,436 + +0.4 1,524,437 - -2.6 1,524,677 + BPHYT_RS06735 0.31 -3.4 1,524,677 + BPHYT_RS06735 0.31 +0.1 1,524,677 + BPHYT_RS06735 0.31 -1.3 1,524,679 + BPHYT_RS06735 0.31 +1.1 1,524,679 + BPHYT_RS06735 0.31 +1.1 1,524,680 - BPHYT_RS06735 0.31 +1.3 1,524,680 - BPHYT_RS06735 0.31 +0.3 1,524,698 - BPHYT_RS06735 0.34 -1.2 1,524,773 - BPHYT_RS06735 0.45 -0.4
Or see this region's nucleotide sequence