Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16490

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_16485 and AO356_16490 are separated by 172 nucleotidesAO356_16490 and AO356_16495 overlap by 4 nucleotides AO356_16485: AO356_16485 - hypothetical protein, at 3,724,236 to 3,725,960 _16485 AO356_16490: AO356_16490 - glutamyl-tRNA reductase, at 3,726,133 to 3,727,422 _16490 AO356_16495: AO356_16495 - peptide chain release factor 1, at 3,727,419 to 3,728,501 _16495 Position (kb) 3726 3727 3728Strain fitness (log2 ratio) -1 0 1 2 3at 3725.186 kb on - strand, within AO356_16485at 3725.186 kb on - strand, within AO356_16485at 3725.541 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.543 kb on - strand, within AO356_16485at 3725.675 kb on - strand, within AO356_16485at 3725.741 kb on - strand, within AO356_16485at 3725.741 kb on - strand, within AO356_16485at 3725.741 kb on - strand, within AO356_16485at 3725.741 kb on - strand, within AO356_16485at 3725.741 kb on - strand, within AO356_16485at 3725.741 kb on - strand, within AO356_16485at 3725.741 kb on - strand, within AO356_16485at 3725.741 kb on - strand, within AO356_16485at 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.955 kb on - strandat 3725.961 kb on - strandat 3725.961 kb on - strandat 3725.961 kb on - strandat 3725.961 kb on - strandat 3725.961 kb on - strandat 3725.961 kb on - strandat 3725.963 kb on - strandat 3725.963 kb on - strandat 3725.963 kb on - strandat 3725.963 kb on - strandat 3726.021 kb on + strandat 3726.021 kb on + strandat 3726.038 kb on + strandat 3726.039 kb on - strandat 3726.058 kb on + strandat 3726.059 kb on - strandat 3726.092 kb on + strandat 3726.092 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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3,725,186 - AO356_16485 0.55 -0.5
3,725,186 - AO356_16485 0.55 +2.8
3,725,541 - AO356_16485 0.76 +1.7
3,725,543 - AO356_16485 0.76 -0.7
3,725,543 - AO356_16485 0.76 -0.1
3,725,543 - AO356_16485 0.76 +0.4
3,725,543 - AO356_16485 0.76 -1.3
3,725,543 - AO356_16485 0.76 +0.5
3,725,543 - AO356_16485 0.76 +1.2
3,725,543 - AO356_16485 0.76 -0.9
3,725,543 - AO356_16485 0.76 -0.7
3,725,543 - AO356_16485 0.76 -1.2
3,725,675 - AO356_16485 0.83 -0.5
3,725,741 - AO356_16485 0.87 +0.3
3,725,741 - AO356_16485 0.87 -1.3
3,725,741 - AO356_16485 0.87 -1.1
3,725,741 - AO356_16485 0.87 -1.0
3,725,741 - AO356_16485 0.87 -1.5
3,725,741 - AO356_16485 0.87 -0.2
3,725,741 - AO356_16485 0.87 +0.3
3,725,741 - AO356_16485 0.87 +0.1
3,725,955 - -1.3
3,725,955 - -0.3
3,725,955 - +1.8
3,725,955 - +0.6
3,725,955 - +0.0
3,725,955 - +0.4
3,725,955 - -1.1
3,725,955 - -0.1
3,725,955 - +0.4
3,725,955 - +1.2
3,725,961 - -0.3
3,725,961 - -0.3
3,725,961 - -0.1
3,725,961 - -0.4
3,725,961 - +0.7
3,725,961 - +0.1
3,725,963 - +1.1
3,725,963 - +0.5
3,725,963 - -0.3
3,725,963 - -0.6
3,726,021 + -0.8
3,726,021 + -1.2
3,726,038 + -1.0
3,726,039 - -0.3
3,726,058 + +0.5
3,726,059 - +0.5
3,726,092 + +0.5
3,726,092 + -0.2

Or see this region's nucleotide sequence