Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_15470 and AO356_15475 are separated by 130 nucleotides AO356_15475 and AO356_15480 are separated by 28 nucleotides AO356_15480 and AO356_15485 are separated by 98 nucleotides
AO356_15470: AO356_15470 - hypothetical protein, at 3,503,151 to 3,504,152
_15470
AO356_15475: AO356_15475 - ferrous iron transporter, at 3,504,283 to 3,505,176
_15475
AO356_15480: AO356_15480 - polyribonucleotide nucleotidyltransferase, at 3,505,205 to 3,505,624
_15480
AO356_15485: AO356_15485 - ATP-dependent helicase, at 3,505,723 to 3,508,242
_15485
Position (kb)
3504
3505
3506 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3503.295 kb on + strand, within AO356_15470 at 3503.296 kb on - strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.391 kb on + strand, within AO356_15470 at 3503.392 kb on - strand, within AO356_15470 at 3503.392 kb on - strand, within AO356_15470 at 3503.414 kb on + strand, within AO356_15470 at 3503.509 kb on - strand, within AO356_15470 at 3503.644 kb on - strand, within AO356_15470 at 3503.656 kb on - strand, within AO356_15470 at 3503.656 kb on - strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.685 kb on + strand, within AO356_15470 at 3503.686 kb on - strand, within AO356_15470 at 3503.686 kb on - strand, within AO356_15470 at 3503.686 kb on - strand, within AO356_15470 at 3503.686 kb on - strand, within AO356_15470 at 3503.712 kb on + strand, within AO356_15470 at 3503.712 kb on + strand, within AO356_15470 at 3503.712 kb on + strand, within AO356_15470 at 3503.713 kb on - strand, within AO356_15470 at 3503.713 kb on - strand, within AO356_15470 at 3503.719 kb on - strand, within AO356_15470 at 3503.757 kb on + strand, within AO356_15470 at 3503.757 kb on + strand, within AO356_15470 at 3503.796 kb on + strand, within AO356_15470 at 3503.809 kb on - strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.821 kb on + strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.822 kb on - strand, within AO356_15470 at 3503.862 kb on + strand, within AO356_15470 at 3503.862 kb on + strand, within AO356_15470 at 3503.862 kb on + strand, within AO356_15470 at 3503.863 kb on - strand, within AO356_15470 at 3503.863 kb on - strand, within AO356_15470 at 3503.863 kb on - strand, within AO356_15470 at 3503.863 kb on - strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.865 kb on + strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.866 kb on - strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.871 kb on + strand, within AO356_15470 at 3503.872 kb on - strand, within AO356_15470 at 3503.892 kb on + strand, within AO356_15470 at 3503.892 kb on + strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3503.893 kb on - strand, within AO356_15470 at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.060 kb on + strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.061 kb on - strand at 3504.066 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.147 kb on + strand at 3504.148 kb on - strand at 3504.148 kb on - strand at 3504.148 kb on - strand at 3504.148 kb on - strand at 3504.148 kb on - strand at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.605 kb on + strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.606 kb on - strand, within AO356_15475 at 3504.664 kb on + strand, within AO356_15475 at 3504.904 kb on - strand, within AO356_15475 at 3504.980 kb on - strand, within AO356_15475 at 3504.980 kb on - strand, within AO356_15475 at 3504.980 kb on - strand, within AO356_15475 at 3504.980 kb on - strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.986 kb on + strand, within AO356_15475 at 3504.987 kb on - strand, within AO356_15475 at 3504.987 kb on - strand, within AO356_15475 at 3504.987 kb on - strand, within AO356_15475 at 3505.410 kb on + strand, within AO356_15480 at 3505.410 kb on + strand, within AO356_15480 at 3505.410 kb on + strand, within AO356_15480 at 3505.410 kb on + strand, within AO356_15480 at 3505.411 kb on - strand, within AO356_15480 at 3505.411 kb on - strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.464 kb on + strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.465 kb on - strand, within AO356_15480 at 3505.542 kb on + strand, within AO356_15480 at 3505.543 kb on - strand, within AO356_15480 at 3505.618 kb on + strand at 3505.618 kb on + strand at 3505.618 kb on + strand at 3505.619 kb on - strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.624 kb on + strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.625 kb on - strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.643 kb on + strand at 3505.644 kb on - strand at 3505.644 kb on - strand at 3505.644 kb on - strand at 3505.644 kb on - strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.646 kb on + strand at 3505.647 kb on - strand at 3505.647 kb on - strand at 3505.647 kb on - strand at 3505.696 kb on + strand at 3505.696 kb on + strand at 3505.697 kb on - strand at 3505.697 kb on - strand at 3505.819 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 3,503,295 + AO356_15470 0.14 +0.1 3,503,296 - AO356_15470 0.14 +0.7 3,503,391 + AO356_15470 0.24 +0.7 3,503,391 + AO356_15470 0.24 +0.3 3,503,391 + AO356_15470 0.24 -0.2 3,503,391 + AO356_15470 0.24 +0.7 3,503,391 + AO356_15470 0.24 -0.1 3,503,392 - AO356_15470 0.24 -0.2 3,503,392 - AO356_15470 0.24 +1.2 3,503,414 + AO356_15470 0.26 -0.1 3,503,509 - AO356_15470 0.36 +0.9 3,503,644 - AO356_15470 0.49 -0.0 3,503,656 - AO356_15470 0.50 +0.9 3,503,656 - AO356_15470 0.50 +0.5 3,503,685 + AO356_15470 0.53 -0.5 3,503,685 + AO356_15470 0.53 -0.1 3,503,685 + AO356_15470 0.53 +0.7 3,503,685 + AO356_15470 0.53 -0.2 3,503,685 + AO356_15470 0.53 -1.1 3,503,686 - AO356_15470 0.53 +1.2 3,503,686 - AO356_15470 0.53 +0.1 3,503,686 - AO356_15470 0.53 -0.5 3,503,686 - AO356_15470 0.53 +0.1 3,503,712 + AO356_15470 0.56 +0.4 3,503,712 + AO356_15470 0.56 +0.2 3,503,712 + AO356_15470 0.56 -0.4 3,503,713 - AO356_15470 0.56 +0.5 3,503,713 - AO356_15470 0.56 +0.3 3,503,719 - AO356_15470 0.57 +1.1 3,503,757 + AO356_15470 0.60 +0.1 3,503,757 + AO356_15470 0.60 -0.3 3,503,796 + AO356_15470 0.64 +0.2 3,503,809 - AO356_15470 0.66 -0.6 3,503,821 + AO356_15470 0.67 -0.3 3,503,821 + AO356_15470 0.67 -0.5 3,503,821 + AO356_15470 0.67 +0.2 3,503,821 + AO356_15470 0.67 +0.7 3,503,821 + AO356_15470 0.67 -1.4 3,503,822 - AO356_15470 0.67 +0.9 3,503,822 - AO356_15470 0.67 +0.1 3,503,822 - AO356_15470 0.67 -0.3 3,503,822 - AO356_15470 0.67 -1.3 3,503,822 - AO356_15470 0.67 -1.0 3,503,862 + AO356_15470 0.71 +0.1 3,503,862 + AO356_15470 0.71 -1.5 3,503,862 + AO356_15470 0.71 -0.4 3,503,863 - AO356_15470 0.71 +0.0 3,503,863 - AO356_15470 0.71 +0.3 3,503,863 - AO356_15470 0.71 +0.8 3,503,863 - AO356_15470 0.71 -0.0 3,503,865 + AO356_15470 0.71 +0.8 3,503,865 + AO356_15470 0.71 -0.8 3,503,865 + AO356_15470 0.71 +0.7 3,503,865 + AO356_15470 0.71 -0.5 3,503,865 + AO356_15470 0.71 +1.9 3,503,865 + AO356_15470 0.71 -1.1 3,503,865 + AO356_15470 0.71 +0.4 3,503,865 + AO356_15470 0.71 -0.3 3,503,865 + AO356_15470 0.71 -0.2 3,503,865 + AO356_15470 0.71 -2.4 3,503,865 + AO356_15470 0.71 -0.6 3,503,865 + AO356_15470 0.71 -0.3 3,503,866 - AO356_15470 0.71 +0.0 3,503,866 - AO356_15470 0.71 +1.0 3,503,866 - AO356_15470 0.71 +0.7 3,503,866 - AO356_15470 0.71 +0.7 3,503,866 - AO356_15470 0.71 -0.1 3,503,866 - AO356_15470 0.71 -0.3 3,503,871 + AO356_15470 0.72 -0.5 3,503,871 + AO356_15470 0.72 -0.8 3,503,871 + AO356_15470 0.72 +0.1 3,503,871 + AO356_15470 0.72 +1.2 3,503,871 + AO356_15470 0.72 +0.8 3,503,871 + AO356_15470 0.72 +1.4 3,503,872 - AO356_15470 0.72 +0.2 3,503,892 + AO356_15470 0.74 +0.2 3,503,892 + AO356_15470 0.74 +0.3 3,503,893 - AO356_15470 0.74 +0.4 3,503,893 - AO356_15470 0.74 +0.3 3,503,893 - AO356_15470 0.74 +0.9 3,503,893 - AO356_15470 0.74 -0.2 3,503,893 - AO356_15470 0.74 +1.1 3,503,893 - AO356_15470 0.74 +0.5 3,503,893 - AO356_15470 0.74 -0.2 3,504,060 + +1.0 3,504,060 + -0.0 3,504,060 + +0.2 3,504,060 + -0.5 3,504,060 + -0.3 3,504,060 + +0.5 3,504,060 + -0.6 3,504,060 + +0.1 3,504,060 + +0.4 3,504,061 - +0.7 3,504,061 - -0.2 3,504,061 - +0.1 3,504,061 - -0.5 3,504,061 - +0.7 3,504,061 - -0.1 3,504,061 - -0.1 3,504,061 - +0.3 3,504,066 + -0.4 3,504,147 + -0.4 3,504,147 + +0.3 3,504,147 + +0.5 3,504,147 + -0.1 3,504,147 + +0.8 3,504,147 + +0.0 3,504,147 + -0.5 3,504,147 + -0.1 3,504,148 - +0.7 3,504,148 - -0.1 3,504,148 - +0.1 3,504,148 - -0.6 3,504,148 - +0.1 3,504,605 + AO356_15475 0.36 +1.3 3,504,605 + AO356_15475 0.36 -0.3 3,504,605 + AO356_15475 0.36 +0.5 3,504,605 + AO356_15475 0.36 -0.1 3,504,605 + AO356_15475 0.36 +0.5 3,504,605 + AO356_15475 0.36 -0.5 3,504,605 + AO356_15475 0.36 -0.5 3,504,605 + AO356_15475 0.36 +0.4 3,504,606 - AO356_15475 0.36 +0.3 3,504,606 - AO356_15475 0.36 +0.0 3,504,606 - AO356_15475 0.36 -0.6 3,504,606 - AO356_15475 0.36 +1.2 3,504,606 - AO356_15475 0.36 +0.5 3,504,606 - AO356_15475 0.36 +0.0 3,504,664 + AO356_15475 0.43 +0.3 3,504,904 - AO356_15475 0.69 -0.5 3,504,980 - AO356_15475 0.78 +0.2 3,504,980 - AO356_15475 0.78 +0.3 3,504,980 - AO356_15475 0.78 +0.4 3,504,980 - AO356_15475 0.78 +0.3 3,504,986 + AO356_15475 0.79 -1.1 3,504,986 + AO356_15475 0.79 -0.0 3,504,986 + AO356_15475 0.79 -0.4 3,504,986 + AO356_15475 0.79 -0.1 3,504,986 + AO356_15475 0.79 -0.5 3,504,987 - AO356_15475 0.79 -0.4 3,504,987 - AO356_15475 0.79 +0.1 3,504,987 - AO356_15475 0.79 -0.8 3,505,410 + AO356_15480 0.49 +0.6 3,505,410 + AO356_15480 0.49 +0.8 3,505,410 + AO356_15480 0.49 +1.2 3,505,410 + AO356_15480 0.49 +0.9 3,505,411 - AO356_15480 0.49 +1.1 3,505,411 - AO356_15480 0.49 -0.0 3,505,464 + AO356_15480 0.62 -1.0 3,505,464 + AO356_15480 0.62 +0.1 3,505,464 + AO356_15480 0.62 -0.6 3,505,464 + AO356_15480 0.62 +1.9 3,505,464 + AO356_15480 0.62 -1.0 3,505,464 + AO356_15480 0.62 +0.9 3,505,464 + AO356_15480 0.62 -0.8 3,505,464 + AO356_15480 0.62 +0.3 3,505,464 + AO356_15480 0.62 +0.2 3,505,465 - AO356_15480 0.62 -0.2 3,505,465 - AO356_15480 0.62 -1.2 3,505,465 - AO356_15480 0.62 -1.2 3,505,465 - AO356_15480 0.62 -1.5 3,505,465 - AO356_15480 0.62 -0.3 3,505,465 - AO356_15480 0.62 -0.1 3,505,465 - AO356_15480 0.62 +0.0 3,505,465 - AO356_15480 0.62 -0.1 3,505,465 - AO356_15480 0.62 +0.9 3,505,542 + AO356_15480 0.80 +1.0 3,505,543 - AO356_15480 0.80 -0.3 3,505,618 + +0.5 3,505,618 + -0.3 3,505,618 + -1.2 3,505,619 - -0.8 3,505,624 + -1.2 3,505,624 + +0.8 3,505,624 + -0.3 3,505,624 + -0.2 3,505,624 + +0.7 3,505,624 + +0.2 3,505,624 + +0.5 3,505,624 + +0.0 3,505,625 - +0.1 3,505,625 - +1.5 3,505,625 - +0.1 3,505,625 - +0.4 3,505,625 - +0.7 3,505,625 - +0.9 3,505,625 - +0.4 3,505,643 + -1.6 3,505,643 + +0.2 3,505,643 + +0.7 3,505,643 + +0.0 3,505,643 + +0.9 3,505,643 + +0.3 3,505,643 + -0.5 3,505,644 - +1.0 3,505,644 - -2.1 3,505,644 - +0.1 3,505,644 - +0.3 3,505,646 + +0.8 3,505,646 + +0.2 3,505,646 + -0.9 3,505,646 + -0.1 3,505,646 + -0.4 3,505,646 + +0.3 3,505,647 - +0.3 3,505,647 - +1.4 3,505,647 - +0.2 3,505,696 + +0.4 3,505,696 + +0.5 3,505,697 - -0.6 3,505,697 - -1.2 3,505,819 - -0.8
Or see this region's nucleotide sequence