Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06845 and AO356_06850 are separated by 131 nucleotides AO356_06850 and AO356_06855 are separated by 10 nucleotides AO356_06855 and AO356_06860 are separated by 10 nucleotides AO356_06860 and AO356_06865 overlap by 1 nucleotides
AO356_06845: AO356_06845 - porin, at 1,511,052 to 1,511,774
_06845
AO356_06850: AO356_06850 - peptide ABC transporter ATP-binding protein, at 1,511,906 to 1,512,673
_06850
AO356_06855: AO356_06855 - peptide ABC transporter ATP-binding protein, at 1,512,684 to 1,513,523
_06855
AO356_06860: AO356_06860 - D-ala-D-ala transporter subunit, at 1,513,534 to 1,514,442
_06860
AO356_06865: AO356_06865 - ABC transporter permease, at 1,514,442 to 1,515,479
_06865
Position (kb)
1512
1513
1514 Strain fitness (log2 ratio)
-2
-1
0
1 at 1511.691 kb on + strand, within AO356_06845 at 1511.691 kb on + strand, within AO356_06845 at 1511.692 kb on - strand, within AO356_06845 at 1511.692 kb on - strand, within AO356_06845 at 1511.692 kb on - strand, within AO356_06845 at 1511.692 kb on - strand, within AO356_06845 at 1511.699 kb on + strand, within AO356_06845 at 1511.700 kb on - strand, within AO356_06845 at 1511.700 kb on - strand, within AO356_06845 at 1511.701 kb on + strand, within AO356_06845 at 1511.702 kb on - strand at 1511.702 kb on - strand at 1511.782 kb on + strand at 1511.791 kb on + strand at 1511.791 kb on + strand at 1511.792 kb on - strand at 1511.792 kb on - strand at 1511.792 kb on - strand at 1511.800 kb on + strand at 1511.801 kb on - strand at 1511.803 kb on + strand at 1511.803 kb on + strand at 1511.803 kb on + strand at 1511.803 kb on + strand at 1511.803 kb on + strand at 1511.803 kb on + strand at 1511.803 kb on + strand at 1511.804 kb on - strand at 1511.804 kb on - strand at 1511.804 kb on - strand at 1511.917 kb on + strand at 1511.918 kb on - strand at 1511.918 kb on - strand at 1511.921 kb on + strand at 1511.922 kb on - strand at 1511.930 kb on + strand at 1511.930 kb on + strand at 1511.930 kb on + strand at 1511.931 kb on - strand at 1511.931 kb on - strand at 1511.931 kb on - strand at 1511.931 kb on - strand at 1511.931 kb on - strand at 1511.964 kb on + strand at 1511.965 kb on - strand at 1511.965 kb on - strand at 1512.093 kb on + strand, within AO356_06850 at 1512.093 kb on + strand, within AO356_06850 at 1512.402 kb on + strand, within AO356_06850 at 1512.402 kb on + strand, within AO356_06850 at 1512.402 kb on + strand, within AO356_06850 at 1512.505 kb on - strand, within AO356_06850 at 1512.505 kb on - strand, within AO356_06850 at 1512.778 kb on + strand, within AO356_06855 at 1512.779 kb on - strand, within AO356_06855 at 1512.839 kb on - strand, within AO356_06855 at 1512.839 kb on - strand, within AO356_06855 at 1512.839 kb on - strand, within AO356_06855 at 1513.081 kb on + strand, within AO356_06855 at 1513.174 kb on + strand, within AO356_06855 at 1513.222 kb on + strand, within AO356_06855 at 1513.222 kb on + strand, within AO356_06855 at 1513.222 kb on + strand, within AO356_06855 at 1513.359 kb on + strand, within AO356_06855 at 1513.359 kb on + strand, within AO356_06855 at 1513.360 kb on - strand, within AO356_06855 at 1513.512 kb on + strand at 1513.513 kb on - strand at 1513.655 kb on + strand, within AO356_06860 at 1513.655 kb on + strand, within AO356_06860 at 1513.655 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.130 kb on - strand, within AO356_06860 at 1514.150 kb on + strand, within AO356_06860 at 1514.150 kb on + strand, within AO356_06860 at 1514.151 kb on - strand, within AO356_06860 at 1514.151 kb on - strand, within AO356_06860 at 1514.180 kb on + strand, within AO356_06860 at 1514.180 kb on + strand, within AO356_06860 at 1514.471 kb on - strand at 1514.471 kb on - strand at 1514.471 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 1,511,691 + AO356_06845 0.88 -1.3 1,511,691 + AO356_06845 0.88 +1.0 1,511,692 - AO356_06845 0.89 +0.1 1,511,692 - AO356_06845 0.89 -1.6 1,511,692 - AO356_06845 0.89 -1.0 1,511,692 - AO356_06845 0.89 +0.2 1,511,699 + AO356_06845 0.89 +0.6 1,511,700 - AO356_06845 0.90 +0.8 1,511,700 - AO356_06845 0.90 -0.2 1,511,701 + AO356_06845 0.90 +0.3 1,511,702 - +1.3 1,511,702 - +0.6 1,511,782 + -2.3 1,511,791 + -1.7 1,511,791 + +1.1 1,511,792 - -0.6 1,511,792 - +1.3 1,511,792 - -0.3 1,511,800 + +1.6 1,511,801 - -1.2 1,511,803 + -0.6 1,511,803 + -0.9 1,511,803 + +0.1 1,511,803 + -0.8 1,511,803 + -1.2 1,511,803 + +0.5 1,511,803 + +0.2 1,511,804 - +0.8 1,511,804 - +0.1 1,511,804 - +1.3 1,511,917 + +0.2 1,511,918 - -0.1 1,511,918 - +0.0 1,511,921 + -0.1 1,511,922 - -0.2 1,511,930 + -0.1 1,511,930 + -0.5 1,511,930 + -1.8 1,511,931 - +0.6 1,511,931 - -0.2 1,511,931 - +0.7 1,511,931 - -0.1 1,511,931 - -0.0 1,511,964 + +0.3 1,511,965 - -0.1 1,511,965 - -1.1 1,512,093 + AO356_06850 0.24 +0.8 1,512,093 + AO356_06850 0.24 +0.4 1,512,402 + AO356_06850 0.65 +1.3 1,512,402 + AO356_06850 0.65 +0.3 1,512,402 + AO356_06850 0.65 -0.7 1,512,505 - AO356_06850 0.78 +0.1 1,512,505 - AO356_06850 0.78 +0.2 1,512,778 + AO356_06855 0.11 +0.3 1,512,779 - AO356_06855 0.11 +1.7 1,512,839 - AO356_06855 0.18 -2.0 1,512,839 - AO356_06855 0.18 +0.1 1,512,839 - AO356_06855 0.18 -0.3 1,513,081 + AO356_06855 0.47 +0.4 1,513,174 + AO356_06855 0.58 -1.5 1,513,222 + AO356_06855 0.64 +0.2 1,513,222 + AO356_06855 0.64 -0.3 1,513,222 + AO356_06855 0.64 +0.1 1,513,359 + AO356_06855 0.80 +0.3 1,513,359 + AO356_06855 0.80 +0.7 1,513,360 - AO356_06855 0.80 -0.4 1,513,512 + +0.4 1,513,513 - -0.5 1,513,655 + AO356_06860 0.13 -0.2 1,513,655 + AO356_06860 0.13 -0.3 1,513,655 + AO356_06860 0.13 -0.7 1,514,129 + AO356_06860 0.65 +0.8 1,514,129 + AO356_06860 0.65 +1.1 1,514,129 + AO356_06860 0.65 -1.4 1,514,129 + AO356_06860 0.65 +1.4 1,514,129 + AO356_06860 0.65 +0.9 1,514,130 - AO356_06860 0.66 +0.6 1,514,150 + AO356_06860 0.68 +0.1 1,514,150 + AO356_06860 0.68 +0.4 1,514,151 - AO356_06860 0.68 -0.7 1,514,151 - AO356_06860 0.68 -0.1 1,514,180 + AO356_06860 0.71 -0.0 1,514,180 + AO356_06860 0.71 +0.7 1,514,471 - +0.5 1,514,471 - +0.5 1,514,471 - +1.6
Or see this region's nucleotide sequence