Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01110 and AO356_01115 are separated by 610 nucleotides AO356_01115 and AO356_01120 are separated by 65 nucleotides AO356_01120 and AO356_01125 overlap by 11 nucleotides
AO356_01110: AO356_01110 - hypothetical protein, at 253,661 to 254,179
_01110
AO356_01115: AO356_01115 - hypothetical protein, at 254,790 to 255,032
_01115
AO356_01120: AO356_01120 - iron ABC transporter permease, at 255,098 to 256,168
_01120
AO356_01125: AO356_01125 - ABC transporter permease, at 256,158 to 258,629
_01125
Position (kb) 255
256
257 Strain fitness (log2 ratio) -2
-1
0
1
2 at 254.237 kb on - strand at 254.237 kb on - strand at 254.248 kb on - strand at 254.248 kb on - strand at 254.248 kb on - strand at 254.304 kb on - strand at 254.335 kb on + strand at 254.377 kb on + strand at 254.377 kb on + strand at 254.385 kb on + strand at 254.423 kb on + strand at 254.423 kb on + strand at 254.423 kb on + strand at 254.424 kb on - strand at 254.424 kb on - strand at 254.431 kb on + strand at 254.437 kb on + strand at 254.437 kb on + strand at 254.437 kb on + strand at 254.438 kb on - strand at 254.504 kb on - strand at 254.505 kb on + strand at 254.522 kb on + strand at 254.522 kb on + strand at 254.523 kb on - strand at 254.550 kb on - strand at 254.968 kb on + strand, within AO356_01115 at 255.061 kb on + strand at 255.310 kb on + strand, within AO356_01120 at 255.310 kb on + strand, within AO356_01120 at 255.311 kb on - strand, within AO356_01120 at 255.311 kb on - strand, within AO356_01120 at 255.369 kb on + strand, within AO356_01120 at 255.369 kb on + strand, within AO356_01120 at 255.370 kb on - strand, within AO356_01120 at 255.574 kb on - strand, within AO356_01120 at 255.574 kb on - strand, within AO356_01120 at 255.574 kb on - strand, within AO356_01120 at 255.574 kb on - strand, within AO356_01120 at 255.576 kb on + strand, within AO356_01120 at 255.577 kb on - strand, within AO356_01120 at 255.666 kb on + strand, within AO356_01120 at 255.666 kb on + strand, within AO356_01120 at 255.666 kb on + strand, within AO356_01120 at 255.667 kb on - strand, within AO356_01120 at 255.981 kb on + strand, within AO356_01120 at 255.982 kb on - strand, within AO356_01120 at 256.159 kb on + strand at 256.217 kb on - strand at 256.792 kb on + strand, within AO356_01125 at 256.792 kb on + strand, within AO356_01125 at 256.792 kb on + strand, within AO356_01125 at 256.793 kb on - strand, within AO356_01125 at 256.793 kb on - strand, within AO356_01125 at 256.796 kb on + strand, within AO356_01125 at 256.797 kb on - strand, within AO356_01125 at 257.122 kb on + strand, within AO356_01125 at 257.122 kb on + strand, within AO356_01125 at 257.122 kb on + strand, within AO356_01125 at 257.122 kb on + strand, within AO356_01125 at 257.123 kb on - strand, within AO356_01125 at 257.123 kb on - strand, within AO356_01125 at 257.123 kb on - strand, within AO356_01125
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 254,237 - +0.6 254,237 - -0.8 254,248 - -0.2 254,248 - +0.6 254,248 - +1.4 254,304 - +0.3 254,335 + +0.9 254,377 + -0.9 254,377 + +0.2 254,385 + +0.8 254,423 + +0.8 254,423 + -0.1 254,423 + +0.3 254,424 - -1.5 254,424 - +0.5 254,431 + +0.9 254,437 + +1.8 254,437 + -0.1 254,437 + -0.1 254,438 - +0.0 254,504 - -0.4 254,505 + -0.3 254,522 + +0.8 254,522 + -0.2 254,523 - -0.2 254,550 - -0.4 254,968 + AO356_01115 0.73 -1.3 255,061 + +0.9 255,310 + AO356_01120 0.20 +0.9 255,310 + AO356_01120 0.20 +0.8 255,311 - AO356_01120 0.20 +0.2 255,311 - AO356_01120 0.20 +0.3 255,369 + AO356_01120 0.25 +1.5 255,369 + AO356_01120 0.25 +0.9 255,370 - AO356_01120 0.25 +0.4 255,574 - AO356_01120 0.44 -0.5 255,574 - AO356_01120 0.44 +0.7 255,574 - AO356_01120 0.44 -0.9 255,574 - AO356_01120 0.44 +0.7 255,576 + AO356_01120 0.45 +0.3 255,577 - AO356_01120 0.45 +0.6 255,666 + AO356_01120 0.53 -0.0 255,666 + AO356_01120 0.53 -0.1 255,666 + AO356_01120 0.53 +1.9 255,667 - AO356_01120 0.53 +0.8 255,981 + AO356_01120 0.82 +0.8 255,982 - AO356_01120 0.83 +1.1 256,159 + +0.1 256,217 - -1.8 256,792 + AO356_01125 0.26 -0.4 256,792 + AO356_01125 0.26 +1.0 256,792 + AO356_01125 0.26 +1.5 256,793 - AO356_01125 0.26 -0.2 256,793 - AO356_01125 0.26 +0.8 256,796 + AO356_01125 0.26 -0.0 256,797 - AO356_01125 0.26 +0.5 257,122 + AO356_01125 0.39 -1.3 257,122 + AO356_01125 0.39 +0.9 257,122 + AO356_01125 0.39 -0.3 257,122 + AO356_01125 0.39 -0.8 257,123 - AO356_01125 0.39 -0.2 257,123 - AO356_01125 0.39 +0.5 257,123 - AO356_01125 0.39 +0.7
Or see this region's nucleotide sequence