Strain Fitness in Shewanella loihica PV-4 around Shew_3785

Experiment: Phosphomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.12 mg/ml
4,502,562	-				+0.3
4,502,976	-				-0.0
4,502,980	+				+0.1
4,503,328	+		Shew_3784	0.83	+0.7
4,503,328	+		Shew_3784	0.83	-0.6
4,503,328	+		Shew_3784	0.83	+0.4
4,503,336	-		Shew_3784	0.86	-0.4
4,503,360	-				+0.5
4,503,527	+				-0.1
4,503,759	+		Shew_3785	0.28	+0.8
4,503,764	+		Shew_3785	0.29	+0.8
4,503,772	-		Shew_3785	0.29	-0.0
4,503,777	-		Shew_3785	0.30	-0.2
4,503,784	-		Shew_3785	0.31	+0.2
4,503,789	-		Shew_3785	0.31	+1.0
4,503,816	+		Shew_3785	0.34	+1.1
4,503,816	+		Shew_3785	0.34	+0.0
4,503,824	-		Shew_3785	0.35	+0.8
4,503,824	-		Shew_3785	0.35	-0.9
4,503,849	+		Shew_3785	0.37	-1.8
4,503,948	+		Shew_3785	0.47	+0.1
4,503,948	+		Shew_3785	0.47	+0.1
4,503,948	+		Shew_3785	0.47	+0.5
4,503,948	+		Shew_3785	0.47	+0.4
4,503,956	-		Shew_3785	0.48	+0.6
4,503,956	-		Shew_3785	0.48	+0.9
4,503,956	-		Shew_3785	0.48	+0.2
4,503,956	-		Shew_3785	0.48	+0.7
4,503,956	-		Shew_3785	0.48	+0.5
4,503,956	-		Shew_3785	0.48	+0.3
4,503,956	-		Shew_3785	0.48	+1.0
4,503,991	-		Shew_3785	0.51	-0.1
4,504,064	+		Shew_3785	0.58	-0.4
4,504,143	-		Shew_3785	0.66	+0.1
4,504,359	-		Shew_3785	0.88	+0.0
4,504,416	-				+0.2
4,504,607	+				-0.3
4,504,621	+				+0.2
4,504,700	-		Shew_3786	0.51	+0.6
4,504,879	-				-0.2
4,504,879	-				-0.0
4,505,133	+	mogA	Shew_3787	0.51	-0.2
4,505,141	-	mogA	Shew_3787	0.53	-0.1
4,505,231	+	mogA	Shew_3787	0.70	+0.3