Strain Fitness in Shewanella loihica PV-4 around Shew_2158
Experiment: Phosphomycin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.12 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,502,218 | + | Shew_2157 | 0.36 | +1.6 | |
2,502,525 | - | Shew_2157 | 0.58 | +0.6 | |
2,502,904 | - | Shew_2157 | 0.86 | -1.6 | |
2,502,983 | + | +0.0 | |||
2,503,117 | - | +1.5 | |||
2,503,265 | + | -0.2 | |||
2,503,351 | - | -0.2 | |||
2,503,463 | + | Shew_2158 | 0.14 | +0.4 | |
2,503,595 | + | Shew_2158 | 0.22 | +1.3 | |
2,503,919 | - | Shew_2158 | 0.41 | +1.3 | |
2,504,288 | + | Shew_2158 | 0.62 | +0.1 | |
2,504,418 | + | Shew_2158 | 0.69 | +0.2 | |
2,504,451 | - | Shew_2158 | 0.71 | -0.1 | |
2,505,360 | - | Shew_2159 | 0.21 | -0.8 | |
2,505,666 | - | Shew_2159 | 0.41 | -0.6 | |
2,505,679 | + | Shew_2159 | 0.41 | +0.4 |
Or see this region's nucleotide sequence