Strain Fitness in Shewanella loihica PV-4 around Shew_2104

Experiment: Phosphomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.12 mg/ml
2,434,794	+	def	Shew_2103	0.33	+0.5
2,434,800	+	def	Shew_2103	0.34	-1.0
2,434,975	+	def	Shew_2103	0.69	-0.8
2,435,331	+				+0.1
2,435,334	-				+0.3
2,435,339	-				+0.7
2,435,428	+				+0.9
2,435,591	+		Shew_2104	0.17	-0.5
2,435,710	-		Shew_2104	0.24	+0.5
2,436,036	+		Shew_2104	0.42	-0.6
2,436,036	+		Shew_2104	0.42	+1.0
2,436,124	-		Shew_2104	0.48	-0.6
2,436,430	-		Shew_2104	0.65	+0.4
2,436,461	+		Shew_2104	0.67	+1.1
2,436,469	-		Shew_2104	0.68	+0.4
2,436,521	-		Shew_2104	0.71	+0.5
2,436,906	-				+0.1
2,436,906	-				-0.3
2,436,947	+				+0.2
2,437,697	-		Shew_2105	0.83	-0.4
2,437,750	-				-0.3
2,437,832	-				-0.5