Strain Fitness in Shewanella loihica PV-4 around Shew_1548
Experiment: Phosphomycin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.12 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,775,824 | + | Shew_1547 | 0.57 | -0.1 | |
1,776,150 | + | Shew_1547 | 0.87 | -1.5 | |
1,776,256 | - | -0.7 | |||
1,776,309 | + | -0.6 | |||
1,776,361 | - | +0.7 | |||
1,776,396 | - | -0.5 | |||
1,776,673 | - | Shew_1548 | 0.26 | +2.2 | |
1,776,727 | - | Shew_1548 | 0.33 | +2.2 | |
1,776,820 | + | Shew_1548 | 0.44 | +2.1 | |
1,776,939 | - | Shew_1548 | 0.59 | +2.1 |
Or see this region's nucleotide sequence