Strain Fitness in Shewanella loihica PV-4 around Shew_1203
Experiment: Phosphomycin 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.12 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,397,233 | + | Shew_1202 | 0.85 | +0.7 | |
| 1,397,256 | + | Shew_1202 | 0.86 | +0.7 | |
| 1,397,381 | - | +0.6 | |||
| 1,397,678 | - | +0.5 | |||
| 1,397,692 | + | -0.4 | |||
| 1,397,802 | + | mazG | Shew_1203 | 0.17 | +0.3 |
| 1,397,934 | + | mazG | Shew_1203 | 0.34 | +0.3 |
| 1,398,094 | + | mazG | Shew_1203 | 0.54 | +1.3 |
| 1,398,149 | + | mazG | Shew_1203 | 0.61 | +0.9 |
Or see this region's nucleotide sequence