Strain Fitness in Shewanella loihica PV-4 around Shew_0135

Experiment: Phosphomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.12 mg/ml
143,704	+		Shew_0134	0.13	+0.0
143,804	-		Shew_0134	0.22	+0.4
143,973	+		Shew_0134	0.37	+0.6
143,981	-		Shew_0134	0.38	-2.0
143,981	-		Shew_0134	0.38	+0.6
143,981	-		Shew_0134	0.38	-0.1
143,981	-		Shew_0134	0.38	+0.6
143,986	-		Shew_0134	0.39	-0.7
144,048	+		Shew_0134	0.44	-0.0
144,053	+		Shew_0134	0.45	+0.0
144,255	-		Shew_0134	0.63	+0.5
144,265	+		Shew_0134	0.63	-0.3
144,619	+				+0.3
144,627	-				-0.3
144,684	-				+0.7
144,963	+		Shew_0135	0.28	+1.6
144,971	-		Shew_0135	0.29	-0.6
144,971	-		Shew_0135	0.29	-0.7
145,396	+		Shew_0135	0.69	+0.3
145,520	+		Shew_0135	0.81	+0.4
145,644	-				-0.7
145,703	-				-0.2
145,746	+				+0.0
145,770	-				+0.6
145,770	-				-0.0
145,770	-				-0.6
145,991	+		Shew_0136	0.10	+0.3
146,102	+		Shew_0136	0.20	+1.2
146,103	+		Shew_0136	0.20	+0.9
146,168	+		Shew_0136	0.26	+0.7
146,187	+		Shew_0136	0.28	+1.0
146,359	-		Shew_0136	0.43	-0.4
146,374	-		Shew_0136	0.45	+1.5
146,374	-		Shew_0136	0.45	+0.8
146,407	-		Shew_0136	0.48	+0.7
146,449	+		Shew_0136	0.51	+1.0
146,498	-		Shew_0136	0.56	-0.9