Strain Fitness in Shewanella loihica PV-4 around Shew_0109

Experiment: Phosphomycin 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.12 mg/ml
118,623	+		Shew_0108	0.10	+1.0
118,794	+		Shew_0108	0.27	+0.8
118,845	+		Shew_0108	0.32	+1.9
118,911	+		Shew_0108	0.38	+1.3
119,256	-		Shew_0108	0.71	+1.2
119,290	+		Shew_0108	0.74	+0.9
119,400	-		Shew_0108	0.85	+0.8
119,422	-		Shew_0108	0.87	+0.5
119,467	+				+1.0
119,482	-				+1.5
119,482	-				+1.4
119,555	-				+0.7
119,572	-				+0.1
119,759	-		Shew_0109	0.13	-0.1
119,785	+		Shew_0109	0.16	+0.1
119,793	-		Shew_0109	0.17	-0.2
119,793	-		Shew_0109	0.17	-0.1
119,907	-		Shew_0109	0.28	+0.0
120,308	+		Shew_0109	0.66	+0.4
120,518	+		Shew_0109	0.86	+0.1
120,523	+		Shew_0109	0.86	+0.2
120,531	-		Shew_0109	0.87	-0.1
120,868	+		Shew_0110	0.20	+0.4
120,868	+		Shew_0110	0.20	-0.3
120,886	+		Shew_0110	0.22	+0.0
120,962	+		Shew_0110	0.31	+0.0
121,093	-		Shew_0110	0.46	+0.3
121,099	-		Shew_0110	0.47	-0.2
121,184	+		Shew_0110	0.57	+0.4
121,192	-		Shew_0110	0.57	-0.7
121,230	+		Shew_0110	0.62	-0.1
121,230	+		Shew_0110	0.62	+0.6
121,296	-		Shew_0110	0.69	+0.6
121,548	+				+0.2
121,556	-				+0.1