Experiment: L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2051 and Ga0059261_2052 overlap by 4 nucleotides Ga0059261_2052 and Ga0059261_2053 overlap by 4 nucleotides Ga0059261_2053 and Ga0059261_2054 overlap by 23 nucleotides
Ga0059261_2051: Ga0059261_2051 - diaminopimelate decarboxylase (EC 4.1.1.20) (from data) , at 2,154,473 to 2,155,732
_2051
Ga0059261_2052: Ga0059261_2052 - siroheme synthase, N-terminal domain, at 2,155,729 to 2,156,484
_2052
Ga0059261_2053: Ga0059261_2053 - Mg2+ and Co2+ transporters, at 2,156,481 to 2,157,431
_2053
Ga0059261_2054: Ga0059261_2054 - Response regulator receiver domain, at 2,157,409 to 2,158,014
_2054
Position (kb)
2155
2156
2157 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2155.115 kb on + strand, within Ga0059261_2051 at 2155.115 kb on + strand, within Ga0059261_2051 at 2155.116 kb on - strand, within Ga0059261_2051 at 2155.116 kb on - strand, within Ga0059261_2051 at 2155.116 kb on - strand, within Ga0059261_2051 at 2155.205 kb on + strand, within Ga0059261_2051 at 2155.205 kb on + strand, within Ga0059261_2051 at 2155.205 kb on + strand, within Ga0059261_2051 at 2155.205 kb on + strand, within Ga0059261_2051 at 2155.205 kb on + strand, within Ga0059261_2051 at 2155.205 kb on + strand, within Ga0059261_2051 at 2155.205 kb on + strand, within Ga0059261_2051 at 2155.206 kb on - strand, within Ga0059261_2051 at 2155.206 kb on - strand, within Ga0059261_2051 at 2155.206 kb on - strand, within Ga0059261_2051 at 2155.206 kb on - strand, within Ga0059261_2051 at 2155.206 kb on - strand at 2155.376 kb on + strand, within Ga0059261_2051 at 2155.376 kb on + strand at 2155.376 kb on + strand, within Ga0059261_2051 at 2155.376 kb on + strand, within Ga0059261_2051 at 2155.376 kb on + strand, within Ga0059261_2051 at 2155.376 kb on + strand, within Ga0059261_2051 at 2155.376 kb on + strand, within Ga0059261_2051 at 2155.376 kb on + strand, within Ga0059261_2051 at 2155.377 kb on - strand, within Ga0059261_2051 at 2155.377 kb on - strand, within Ga0059261_2051 at 2155.377 kb on - strand, within Ga0059261_2051 at 2155.377 kb on - strand, within Ga0059261_2051 at 2155.377 kb on - strand, within Ga0059261_2051 at 2155.377 kb on - strand, within Ga0059261_2051 at 2155.377 kb on - strand, within Ga0059261_2051 at 2155.424 kb on + strand, within Ga0059261_2051 at 2155.424 kb on + strand, within Ga0059261_2051 at 2155.424 kb on + strand, within Ga0059261_2051 at 2155.424 kb on + strand, within Ga0059261_2051 at 2155.424 kb on + strand, within Ga0059261_2051 at 2155.424 kb on + strand, within Ga0059261_2051 at 2155.424 kb on + strand, within Ga0059261_2051 at 2155.425 kb on - strand, within Ga0059261_2051 at 2155.425 kb on - strand, within Ga0059261_2051 at 2155.425 kb on - strand, within Ga0059261_2051 at 2155.425 kb on - strand, within Ga0059261_2051 at 2155.433 kb on + strand, within Ga0059261_2051 at 2155.433 kb on + strand, within Ga0059261_2051 at 2155.433 kb on + strand, within Ga0059261_2051 at 2155.433 kb on + strand, within Ga0059261_2051 at 2155.434 kb on - strand, within Ga0059261_2051 at 2155.586 kb on + strand, within Ga0059261_2051 at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.610 kb on + strand at 2155.611 kb on - strand at 2155.611 kb on - strand at 2155.611 kb on - strand at 2155.611 kb on - strand at 2155.611 kb on - strand at 2155.611 kb on - strand at 2155.611 kb on - strand at 2155.611 kb on - strand at 2155.611 kb on - strand at 2155.612 kb on + strand at 2155.612 kb on + strand at 2155.612 kb on + strand at 2155.613 kb on - strand at 2155.613 kb on - strand at 2156.081 kb on + strand, within Ga0059261_2052 at 2156.082 kb on - strand, within Ga0059261_2052 at 2156.082 kb on - strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.370 kb on + strand, within Ga0059261_2052 at 2156.443 kb on - strand at 2156.496 kb on + strand at 2156.496 kb on + strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.772 kb on + strand, within Ga0059261_2053 at 2156.772 kb on + strand, within Ga0059261_2053 at 2156.772 kb on + strand, within Ga0059261_2053 at 2156.773 kb on - strand, within Ga0059261_2053 at 2156.773 kb on - strand, within Ga0059261_2053 at 2156.773 kb on - strand, within Ga0059261_2053 at 2156.773 kb on - strand, within Ga0059261_2053 at 2156.773 kb on - strand, within Ga0059261_2053 at 2157.008 kb on + strand, within Ga0059261_2053 at 2157.008 kb on + strand, within Ga0059261_2053 at 2157.008 kb on - strand, within Ga0059261_2053 at 2157.009 kb on - strand, within Ga0059261_2053 at 2157.009 kb on - strand, within Ga0059261_2053 at 2157.009 kb on - strand, within Ga0059261_2053 at 2157.048 kb on + strand, within Ga0059261_2053 at 2157.049 kb on - strand, within Ga0059261_2053 at 2157.173 kb on + strand, within Ga0059261_2053 at 2157.174 kb on - strand, within Ga0059261_2053 at 2157.174 kb on - strand, within Ga0059261_2053 at 2157.174 kb on - strand, within Ga0059261_2053 at 2157.174 kb on - strand, within Ga0059261_2053 at 2157.330 kb on + strand, within Ga0059261_2053 at 2157.330 kb on + strand, within Ga0059261_2053 at 2157.402 kb on + strand at 2157.402 kb on + strand at 2157.402 kb on + strand at 2157.402 kb on + strand at 2157.402 kb on + strand at 2157.402 kb on + strand at 2157.403 kb on - strand at 2157.403 kb on - strand at 2157.403 kb on - strand at 2157.403 kb on - strand at 2157.403 kb on - strand at 2157.403 kb on - strand at 2157.403 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) and 0.25mM L-Methionine; no added vitamins remove 2,155,115 + Ga0059261_2051 0.51 -3.7 2,155,115 + Ga0059261_2051 0.51 -4.5 2,155,116 - Ga0059261_2051 0.51 -4.7 2,155,116 - Ga0059261_2051 0.51 -5.9 2,155,116 - Ga0059261_2051 0.51 -1.4 2,155,205 + Ga0059261_2051 0.58 -4.0 2,155,205 + Ga0059261_2051 0.58 -3.6 2,155,205 + Ga0059261_2051 0.58 -2.3 2,155,205 + Ga0059261_2051 0.58 -6.5 2,155,205 + Ga0059261_2051 0.58 -4.8 2,155,205 + Ga0059261_2051 0.58 -1.5 2,155,205 + Ga0059261_2051 0.58 -3.7 2,155,206 - Ga0059261_2051 0.58 -3.2 2,155,206 - Ga0059261_2051 0.58 -2.2 2,155,206 - Ga0059261_2051 0.58 -4.9 2,155,206 - Ga0059261_2051 0.58 -3.1 2,155,206 - -1.5 2,155,376 + Ga0059261_2051 0.72 -5.7 2,155,376 + -0.8 2,155,376 + Ga0059261_2051 0.72 -5.1 2,155,376 + Ga0059261_2051 0.72 -3.7 2,155,376 + Ga0059261_2051 0.72 -5.2 2,155,376 + Ga0059261_2051 0.72 -4.2 2,155,376 + Ga0059261_2051 0.72 -4.0 2,155,376 + Ga0059261_2051 0.72 -2.4 2,155,377 - Ga0059261_2051 0.72 -3.7 2,155,377 - Ga0059261_2051 0.72 -6.0 2,155,377 - Ga0059261_2051 0.72 -4.7 2,155,377 - Ga0059261_2051 0.72 -3.9 2,155,377 - Ga0059261_2051 0.72 -3.3 2,155,377 - Ga0059261_2051 0.72 -4.5 2,155,377 - Ga0059261_2051 0.72 -4.1 2,155,424 + Ga0059261_2051 0.75 -6.6 2,155,424 + Ga0059261_2051 0.75 -3.9 2,155,424 + Ga0059261_2051 0.75 -6.1 2,155,424 + Ga0059261_2051 0.75 -3.9 2,155,424 + Ga0059261_2051 0.75 -4.0 2,155,424 + Ga0059261_2051 0.75 -3.6 2,155,424 + Ga0059261_2051 0.75 -2.4 2,155,425 - Ga0059261_2051 0.76 -0.3 2,155,425 - Ga0059261_2051 0.76 -3.8 2,155,425 - Ga0059261_2051 0.76 -4.9 2,155,425 - Ga0059261_2051 0.76 -4.2 2,155,433 + Ga0059261_2051 0.76 -5.7 2,155,433 + Ga0059261_2051 0.76 -6.7 2,155,433 + Ga0059261_2051 0.76 -5.3 2,155,433 + Ga0059261_2051 0.76 -4.9 2,155,434 - Ga0059261_2051 0.76 -5.4 2,155,586 + Ga0059261_2051 0.88 -6.2 2,155,610 + -4.5 2,155,610 + -4.8 2,155,610 + -5.3 2,155,610 + -2.5 2,155,610 + -4.6 2,155,610 + -4.3 2,155,610 + -3.0 2,155,610 + -5.8 2,155,610 + -2.0 2,155,610 + -6.3 2,155,610 + -3.6 2,155,611 - -1.5 2,155,611 - -3.8 2,155,611 - -3.0 2,155,611 - -1.2 2,155,611 - -4.8 2,155,611 - -5.0 2,155,611 - -1.1 2,155,611 - -4.4 2,155,611 - -4.4 2,155,612 + -5.5 2,155,612 + -5.9 2,155,612 + -4.7 2,155,613 - -4.7 2,155,613 - -2.7 2,156,081 + Ga0059261_2052 0.47 -1.0 2,156,082 - Ga0059261_2052 0.47 -0.5 2,156,082 - Ga0059261_2052 0.47 -2.2 2,156,370 + Ga0059261_2052 0.85 -1.1 2,156,370 + Ga0059261_2052 0.85 +0.3 2,156,370 + Ga0059261_2052 0.85 -0.2 2,156,370 + Ga0059261_2052 0.85 +0.5 2,156,370 + Ga0059261_2052 0.85 -0.5 2,156,370 + Ga0059261_2052 0.85 -0.2 2,156,370 + Ga0059261_2052 0.85 +0.1 2,156,370 + Ga0059261_2052 0.85 -0.3 2,156,370 + Ga0059261_2052 0.85 +0.7 2,156,443 - +0.2 2,156,496 + -0.0 2,156,496 + -0.5 2,156,497 - +0.4 2,156,497 - +0.5 2,156,497 - -0.0 2,156,497 - +1.1 2,156,497 - -0.8 2,156,497 - -0.3 2,156,497 - +0.0 2,156,772 + Ga0059261_2053 0.31 -1.4 2,156,772 + Ga0059261_2053 0.31 -0.6 2,156,772 + Ga0059261_2053 0.31 +0.2 2,156,773 - Ga0059261_2053 0.31 +0.8 2,156,773 - Ga0059261_2053 0.31 -0.0 2,156,773 - Ga0059261_2053 0.31 -0.5 2,156,773 - Ga0059261_2053 0.31 +0.9 2,156,773 - Ga0059261_2053 0.31 +0.5 2,157,008 + Ga0059261_2053 0.55 +0.1 2,157,008 + Ga0059261_2053 0.55 -0.6 2,157,008 - Ga0059261_2053 0.55 -0.9 2,157,009 - Ga0059261_2053 0.56 +0.1 2,157,009 - Ga0059261_2053 0.56 +0.0 2,157,009 - Ga0059261_2053 0.56 +0.0 2,157,048 + Ga0059261_2053 0.60 +0.1 2,157,049 - Ga0059261_2053 0.60 +0.5 2,157,173 + Ga0059261_2053 0.73 -0.5 2,157,174 - Ga0059261_2053 0.73 +0.1 2,157,174 - Ga0059261_2053 0.73 +0.9 2,157,174 - Ga0059261_2053 0.73 -0.0 2,157,174 - Ga0059261_2053 0.73 -0.7 2,157,330 + Ga0059261_2053 0.89 +0.1 2,157,330 + Ga0059261_2053 0.89 +0.1 2,157,402 + -0.0 2,157,402 + +0.6 2,157,402 + +0.4 2,157,402 + -0.8 2,157,402 + +0.0 2,157,402 + -1.2 2,157,403 - +0.3 2,157,403 - +0.1 2,157,403 - -0.4 2,157,403 - -0.0 2,157,403 - +0.4 2,157,403 - +0.1 2,157,403 - -0.3
Or see this region's nucleotide sequence