Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_18255

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
4,113,934	+		AO356_18250	0.39	-0.9
4,113,934	+		AO356_18250	0.39	+0.3
4,113,934	+		AO356_18250	0.39	-0.4
4,113,934	+		AO356_18250	0.39	-0.0
4,113,934	+		AO356_18250	0.39	-0.1
4,113,934	+		AO356_18250	0.39	+0.4
4,113,935	-		AO356_18250	0.40	+0.6
4,113,935	-		AO356_18250	0.40	+1.6
4,113,935	-		AO356_18250	0.40	-0.6
4,113,953	+		AO356_18250	0.41	-0.2
4,113,953	+		AO356_18250	0.41	+1.0
4,114,163	+		AO356_18250	0.55	+1.2
4,114,163	+		AO356_18250	0.55	+0.4
4,114,286	+		AO356_18250	0.63	+0.4
4,114,287	-		AO356_18250	0.63	-0.2
4,114,430	+		AO356_18250	0.72	+0.7
4,114,430	+		AO356_18250	0.72	-0.3
4,114,430	+		AO356_18250	0.72	-0.0
4,114,430	+		AO356_18250	0.72	-1.1
4,114,430	+		AO356_18250	0.72	+0.1
4,114,431	-		AO356_18250	0.72	+1.8
4,114,431	-		AO356_18250	0.72	-0.1
4,114,431	-		AO356_18250	0.72	+0.3
4,114,431	-		AO356_18250	0.72	+0.2
4,114,466	+		AO356_18250	0.75	-0.4
4,114,466	+		AO356_18250	0.75	+0.2
4,114,466	+		AO356_18250	0.75	+0.3
4,114,466	+		AO356_18250	0.75	+0.9
4,114,466	+		AO356_18250	0.75	+0.6
4,114,466	+		AO356_18250	0.75	+0.2
4,114,466	+		AO356_18250	0.75	+1.2
4,114,466	+		AO356_18250	0.75	+0.1
4,114,466	+		AO356_18250	0.75	+1.1
4,114,466	+		AO356_18250	0.75	-0.7
4,114,466	+		AO356_18250	0.75	+0.4
4,114,466	+		AO356_18250	0.75	-1.1
4,114,466	+		AO356_18250	0.75	+0.5
4,114,467	-		AO356_18250	0.75	+1.2
4,114,467	-		AO356_18250	0.75	+0.3
4,114,467	-		AO356_18250	0.75	+0.5
4,114,467	-		AO356_18250	0.75	-0.1
4,114,467	-		AO356_18250	0.75	+0.2
4,114,467	-		AO356_18250	0.75	-0.2
4,114,467	-		AO356_18250	0.75	+0.1
4,114,541	+		AO356_18250	0.80	-0.2
4,114,541	+		AO356_18250	0.80	+0.6
4,114,541	+		AO356_18250	0.80	+0.2
4,114,541	+		AO356_18250	0.80	+0.3
4,114,541	+		AO356_18250	0.80	+0.0
4,114,541	+		AO356_18250	0.80	-0.1
4,114,542	-		AO356_18250	0.80	+0.9
4,114,718	+				-0.2
4,114,820	+				+1.0
4,114,820	+				+1.4
4,114,820	+				+0.7
4,114,820	+				+0.2
4,114,820	+				+0.3
4,114,820	+				-1.5
4,114,820	+				+0.2
4,114,820	+				+0.7
4,114,820	+				+0.9
4,114,820	+				-0.3
4,114,820	+				+0.9
4,114,821	-				-1.2
4,114,821	-				+0.2
4,114,821	-				+0.0
4,114,821	-				+0.4
4,114,821	-				-1.4
4,114,821	-				+0.3
4,114,821	-				+0.0
4,114,821	-				+0.2
4,114,821	-				+0.4
4,114,821	-				+0.0
4,114,821	-				+0.1
4,114,821	-				+1.1
4,114,868	+				-1.8
4,114,869	-				+0.3
4,114,869	-				+0.3
4,114,880	+				+0.8
4,114,880	+				+0.4
4,114,880	+				+0.1
4,114,880	+				+0.2
4,114,881	-				-0.0
4,114,979	+				+0.0
4,114,980	-				+0.9
4,114,980	-				-0.8
4,114,980	-				-0.6
4,114,980	-				-1.1
4,114,980	-				+0.6
4,114,980	-				+0.7
4,114,980	-				+1.2
4,114,980	-				-0.0
4,114,987	-				-0.2
4,114,987	-				+0.3
4,114,987	-				+0.6
4,114,987	-				+0.2
4,114,987	-				-0.2
4,115,080	+		AO356_18255	0.17	-0.2
4,115,144	+		AO356_18255	0.25	-0.3
4,115,214	+		AO356_18255	0.33	+0.7
4,115,226	+		AO356_18255	0.35	+0.8
4,115,226	+		AO356_18255	0.35	+0.1
4,115,226	+		AO356_18255	0.35	-2.0
4,115,227	-		AO356_18255	0.35	+0.0
4,115,227	-		AO356_18255	0.35	-0.5
4,115,227	-		AO356_18255	0.35	-0.1
4,115,227	-		AO356_18255	0.35	+0.2
4,115,362	+		AO356_18255	0.50	-2.0
4,115,442	+		AO356_18255	0.60	-0.8
4,115,442	+		AO356_18255	0.60	+1.0
4,115,442	+		AO356_18255	0.60	-1.3
4,115,442	+		AO356_18255	0.60	+1.0
4,115,442	+		AO356_18255	0.60	-0.6
4,115,443	-		AO356_18255	0.60	+0.1
4,115,443	-		AO356_18255	0.60	-1.8
4,115,443	-		AO356_18255	0.60	+0.4
4,115,453	-		AO356_18255	0.61	-0.5
4,115,453	-		AO356_18255	0.61	+0.3
4,115,505	+		AO356_18255	0.67	+1.0
4,115,505	+		AO356_18255	0.67	-0.1
4,115,505	+		AO356_18255	0.67	+0.7
4,115,506	-		AO356_18255	0.67	-0.8
4,115,506	-		AO356_18255	0.67	+0.3
4,115,506	-		AO356_18255	0.67	+0.2
4,115,506	-		AO356_18255	0.67	+0.8
4,115,506	-		AO356_18255	0.67	+0.1
4,115,506	-		AO356_18255	0.67	+0.2
4,115,507	+		AO356_18255	0.67	+0.6
4,115,507	+		AO356_18255	0.67	-0.1
4,115,507	+		AO356_18255	0.67	+1.2
4,115,508	-		AO356_18255	0.68	+0.0
4,115,508	-		AO356_18255	0.68	-0.4
4,115,508	-		AO356_18255	0.68	+0.3
4,115,508	-		AO356_18255	0.68	+0.7
4,115,508	-		AO356_18255	0.68	-1.3
4,115,508	-		AO356_18255	0.68	+0.0
4,115,508	-		AO356_18255	0.68	+0.8
4,115,509	+		AO356_18255	0.68	+0.2
4,115,509	+		AO356_18255	0.68	+0.3
4,115,509	+		AO356_18255	0.68	+1.0
4,115,509	+		AO356_18255	0.68	-0.2
4,115,509	+		AO356_18255	0.68	-0.2
4,115,509	+		AO356_18255	0.68	-0.1
4,115,509	+		AO356_18255	0.68	+0.6
4,115,510	-		AO356_18255	0.68	-0.7
4,115,510	-		AO356_18255	0.68	-0.1
4,115,510	-		AO356_18255	0.68	+1.6
4,115,510	-		AO356_18255	0.68	-0.3
4,115,510	-		AO356_18255	0.68	+1.2
4,115,510	-		AO356_18255	0.68	+0.9
4,115,510	-		AO356_18255	0.68	-0.0
4,115,510	-		AO356_18255	0.68	-0.4
4,115,510	-		AO356_18255	0.68	-0.2
4,115,510	-		AO356_18255	0.68	-0.2
4,115,510	-		AO356_18255	0.68	+0.9
4,115,510	-		AO356_18255	0.68	+0.6
4,115,606	-		AO356_18255	0.79	+0.1
4,115,606	-		AO356_18255	0.79	-0.1
4,115,606	-		AO356_18255	0.79	-0.2
4,115,606	-		AO356_18255	0.79	-0.4
4,115,770	-				-0.2
4,115,770	-				+0.7
4,115,770	-				+0.7
4,115,770	-				+0.5
4,115,822	+				-0.0
4,115,822	+				-0.4
4,115,822	+				+0.2
4,115,893	+				-0.0
4,115,893	+				-1.2
4,115,893	+				+0.5
4,115,893	+				+0.5
4,115,893	+				+0.6
4,115,893	+				-1.0
4,115,893	+				+0.9
4,115,893	+				-1.8
4,115,893	+				+0.4
4,115,893	+				+1.3
4,115,893	+				-0.3
4,115,894	-				-0.3
4,115,894	-				-0.5
4,115,894	-				+0.5
4,115,894	-				-0.8
4,115,894	-				+0.1
4,115,894	-				+0.1
4,115,894	-				+0.6
4,115,894	-				-0.2
4,115,894	-				+0.2
4,115,894	-				+0.2
4,115,894	-				-0.8
4,115,894	-				-0.7
4,115,919	+				-1.2
4,115,978	-				+0.4
4,115,978	-				-0.5
4,116,063	+				-0.2
4,116,063	+				+0.2
4,116,063	+				+0.6
4,116,064	-				+0.0
4,116,064	-				+1.4
4,116,130	+				+0.3
4,116,131	-				-0.1
4,116,131	-				+0.3
4,116,138	+				-0.0
4,116,138	+				+0.9
4,116,164	+		AO356_18260	0.12	+1.6
4,116,164	+		AO356_18260	0.12	+0.5
4,116,165	-		AO356_18260	0.12	-0.0
4,116,165	-		AO356_18260	0.12	-0.9
4,116,165	-		AO356_18260	0.12	+0.1
4,116,191	+		AO356_18260	0.18	+0.3
4,116,191	+		AO356_18260	0.18	+1.1
4,116,192	-		AO356_18260	0.18	-0.7
4,116,289	-		AO356_18260	0.39	+0.3
4,116,579	-				-0.1
4,116,579	-				-0.1
4,116,579	-				-0.1
4,116,606	+				+0.4
4,116,607	-				+0.2
4,116,607	-				+0.6
4,116,639	-				-1.3
4,116,679	+				+0.1
4,116,680	-				+1.0
4,116,762	+				+0.2
4,116,763	-				-0.8
4,116,763	-				+0.3
4,116,763	-				+0.3
4,116,763	-				-0.2