Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_14420

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
3,279,200	+		AO356_14415	0.13	-0.9
3,279,200	+		AO356_14415	0.13	-1.5
3,279,200	+		AO356_14415	0.13	+0.2
3,279,200	+		AO356_14415	0.13	+0.1
3,279,200	+		AO356_14415	0.13	-0.7
3,279,200	+		AO356_14415	0.13	-0.3
3,279,200	+		AO356_14415	0.13	-0.0
3,279,201	-		AO356_14415	0.14	+0.3
3,279,366	+		AO356_14415	0.34	-0.6
3,279,366	+		AO356_14415	0.34	-0.3
3,279,406	+		AO356_14415	0.39	-0.0
3,279,407	-		AO356_14415	0.39	+0.9
3,279,517	-		AO356_14415	0.52	-0.3
3,279,700	-		AO356_14415	0.74	-0.1
3,279,700	-		AO356_14415	0.74	+1.3
3,279,700	-		AO356_14415	0.74	-0.6
3,279,763	+		AO356_14415	0.82	+0.2
3,279,763	+		AO356_14415	0.82	+0.6
3,279,763	+		AO356_14415	0.82	-1.1
3,279,796	+		AO356_14415	0.86	+0.1
3,279,796	+		AO356_14415	0.86	-0.0
3,279,796	+		AO356_14415	0.86	-1.3
3,279,796	+		AO356_14415	0.86	-0.1
3,279,797	-		AO356_14415	0.86	-1.8
3,279,797	-		AO356_14415	0.86	-1.9
3,279,797	-		AO356_14415	0.86	-2.2
3,279,797	-		AO356_14415	0.86	-1.5
3,279,942	+				+0.2
3,279,943	-				-2.6
3,279,943	-				-3.4
3,279,943	-				-1.0
3,279,943	-				-3.7
3,280,018	+				-3.9
3,280,019	-				-3.3
3,280,078	+				-4.0
3,280,108	+				-3.3
3,280,108	+				-0.4
3,280,150	+		AO356_14420	0.12	-2.7
3,280,150	+		AO356_14420	0.12	-0.6
3,280,288	+		AO356_14420	0.21	-3.8
3,280,289	-		AO356_14420	0.21	-3.3
3,280,342	+		AO356_14420	0.24	-0.7
3,280,366	+		AO356_14420	0.26	-2.2
3,280,367	-		AO356_14420	0.26	-4.0
3,280,519	+		AO356_14420	0.36	-2.2
3,280,520	-		AO356_14420	0.37	-3.2
3,280,520	-		AO356_14420	0.37	-3.7
3,280,654	+		AO356_14420	0.46	-2.6
3,280,684	+		AO356_14420	0.48	-2.4
3,280,684	+		AO356_14420	0.48	-1.4
3,280,684	+		AO356_14420	0.48	-1.7
3,280,684	+		AO356_14420	0.48	-2.8
3,280,684	+		AO356_14420	0.48	-2.9
3,280,684	+		AO356_14420	0.48	-1.8
3,280,685	-		AO356_14420	0.48	-3.6
3,280,685	-		AO356_14420	0.48	-3.9
3,280,685	-		AO356_14420	0.48	-2.5
3,280,685	-		AO356_14420	0.48	-1.9
3,280,685	-		AO356_14420	0.48	-3.6
3,280,685	-		AO356_14420	0.48	-2.4
3,280,685	-		AO356_14420	0.48	-3.2
3,280,766	-		AO356_14420	0.53	-3.2
3,280,798	+		AO356_14420	0.55	-3.2
3,280,798	+		AO356_14420	0.55	-3.2
3,280,798	+		AO356_14420	0.55	-3.1
3,280,798	+		AO356_14420	0.55	-1.5
3,280,798	+		AO356_14420	0.55	-3.0
3,280,798	+		AO356_14420	0.55	-3.1
3,280,799	-		AO356_14420	0.55	-2.4
3,280,799	-		AO356_14420	0.55	-1.9
3,280,799	-		AO356_14420	0.55	-1.2
3,280,799	-		AO356_14420	0.55	-3.3
3,280,799	-		AO356_14420	0.55	-3.2
3,280,799	-		AO356_14420	0.55	-2.8
3,280,799	-		AO356_14420	0.55	-3.4
3,280,799	-		AO356_14420	0.55	-3.4
3,280,799	-		AO356_14420	0.55	-2.6
3,280,799	-		AO356_14420	0.55	-1.8
3,280,799	-		AO356_14420	0.55	-1.6
3,280,804	+		AO356_14420	0.56	-2.4
3,280,804	+		AO356_14420	0.56	-3.2
3,280,804	+		AO356_14420	0.56	+2.0
3,280,804	+		AO356_14420	0.56	-2.5
3,280,804	+		AO356_14420	0.56	-1.0
3,280,804	+		AO356_14420	0.56	-3.3
3,280,804	+		AO356_14420	0.56	-3.3
3,280,804	+		AO356_14420	0.56	-2.4
3,280,804	+		AO356_14420	0.56	-2.3
3,280,804	+		AO356_14420	0.56	-2.6
3,280,804	+		AO356_14420	0.56	-2.7
3,280,804	+		AO356_14420	0.56	-3.6
3,280,805	-		AO356_14420	0.56	-1.1
3,280,805	-		AO356_14420	0.56	-3.8
3,280,805	-		AO356_14420	0.56	-2.4
3,280,805	-		AO356_14420	0.56	-2.9
3,280,805	-		AO356_14420	0.56	-2.2
3,280,805	-		AO356_14420	0.56	-2.9
3,280,805	-		AO356_14420	0.56	-3.6
3,280,805	-		AO356_14420	0.56	-4.4
3,280,805	-		AO356_14420	0.56	-3.3
3,280,805	-		AO356_14420	0.56	-2.0
3,280,805	-		AO356_14420	0.56	-1.8
3,280,805	-		AO356_14420	0.56	-3.8
3,280,805	-		AO356_14420	0.56	-2.9
3,280,805	-		AO356_14420	0.56	-3.8
3,280,805	-		AO356_14420	0.56	-3.9
3,281,078	-		AO356_14420	0.74	-3.1
3,281,078	-		AO356_14420	0.74	-3.2
3,281,246	-		AO356_14420	0.85	-3.2
3,281,246	-		AO356_14420	0.85	-1.2
3,281,264	-		AO356_14420	0.87	-4.1
3,281,563	+				+0.6
3,281,563	+				+0.9
3,281,563	+				-0.1
3,281,563	+				+0.8
3,281,564	-				-0.2
3,281,564	-				+1.0
3,281,564	-				+0.0
3,281,564	-				-0.2
3,281,564	-				-1.4
3,281,564	-				+1.0
3,281,564	-				+0.0
3,281,574	+				+0.1
3,281,574	+				-0.4
3,281,574	+				-1.1
3,281,574	+				-0.9
3,281,574	+				+0.2
3,281,574	+				+1.2
3,281,575	-				+0.4
3,281,575	-				+0.1
3,281,575	-				-0.4
3,281,696	+				+0.6
3,281,696	+				-0.0
3,281,696	+				+0.0
3,281,696	+				-0.5
3,281,696	+				-0.5
3,281,696	+				+0.3
3,281,696	+				+0.5
3,281,696	+				-0.2
3,281,697	-				-0.0
3,281,697	-				-0.8
3,281,697	-				-0.4
3,281,697	-				-0.9
3,281,697	-				+0.6
3,281,697	-				-0.8
3,281,697	-				-0.2
3,281,851	+		AO356_14425	0.12	+0.3
3,281,851	+		AO356_14425	0.12	-1.3
3,281,852	-		AO356_14425	0.12	+0.6
3,281,880	+		AO356_14425	0.13	+0.8
3,281,880	+		AO356_14425	0.13	+0.3
3,281,880	+		AO356_14425	0.13	+0.1
3,281,880	+		AO356_14425	0.13	+0.4
3,281,881	-		AO356_14425	0.13	-0.0
3,281,881	-		AO356_14425	0.13	-1.5
3,281,881	-		AO356_14425	0.13	+0.4
3,281,881	-		AO356_14425	0.13	-1.8
3,281,881	-		AO356_14425	0.13	+0.2
3,281,905	+		AO356_14425	0.14	-0.3
3,281,905	+		AO356_14425	0.14	-0.6
3,281,905	+		AO356_14425	0.14	+0.3
3,281,905	+		AO356_14425	0.14	-0.4
3,281,905	+		AO356_14425	0.14	-0.2
3,281,905	+		AO356_14425	0.14	+0.2
3,281,905	+		AO356_14425	0.14	+0.3
3,281,906	-		AO356_14425	0.14	+0.0
3,281,906	-		AO356_14425	0.14	+0.5
3,281,906	-		AO356_14425	0.14	+0.3
3,281,906	-		AO356_14425	0.14	-0.5
3,281,906	-		AO356_14425	0.14	+1.3
3,281,906	-		AO356_14425	0.14	+0.6
3,281,906	-		AO356_14425	0.14	-0.1
3,281,906	-		AO356_14425	0.14	+0.4
3,281,995	+		AO356_14425	0.19	-0.6
3,281,995	+		AO356_14425	0.19	+0.5
3,281,995	+		AO356_14425	0.19	-0.4
3,281,996	-		AO356_14425	0.19	+0.1
3,282,020	-		AO356_14425	0.20	-0.6
3,282,020	-		AO356_14425	0.20	+0.6
3,282,020	-		AO356_14425	0.20	+0.6
3,282,020	-		AO356_14425	0.20	+0.8
3,282,033	-		AO356_14425	0.21	-0.6
3,282,175	+		AO356_14425	0.29	+0.7
3,282,176	-		AO356_14425	0.29	+0.2
3,282,253	+		AO356_14425	0.33	-0.2
3,282,253	+		AO356_14425	0.33	+0.5
3,282,253	+		AO356_14425	0.33	+0.4
3,282,253	+		AO356_14425	0.33	-0.4
3,282,254	-		AO356_14425	0.33	-0.6
3,282,269	-		AO356_14425	0.33	+0.3
3,282,269	-		AO356_14425	0.33	-0.7
3,282,307	+		AO356_14425	0.35	+0.5
3,282,327	+		AO356_14425	0.36	+0.1