Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_13095

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
2,978,271	+		AO356_13090	0.48	-0.1
2,978,271	+		AO356_13090	0.48	+0.5
2,978,271	+		AO356_13090	0.48	-0.0
2,978,271	+		AO356_13090	0.48	-1.9
2,978,271	+		AO356_13090	0.48	-0.1
2,978,272	-		AO356_13090	0.48	-0.6
2,978,272	-		AO356_13090	0.48	+0.6
2,978,272	-		AO356_13090	0.48	+0.3
2,978,272	-		AO356_13090	0.48	-0.1
2,978,272	-		AO356_13090	0.48	-0.7
2,978,272	-		AO356_13090	0.48	-0.1
2,978,272	-		AO356_13090	0.48	+0.7
2,978,272	-		AO356_13090	0.48	+0.7
2,978,272	-		AO356_13090	0.48	+0.2
2,978,272	-		AO356_13090	0.48	-0.8
2,978,316	+		AO356_13090	0.51	-0.5
2,978,316	+		AO356_13090	0.51	-0.5
2,978,316	+		AO356_13090	0.51	-0.3
2,978,317	-		AO356_13090	0.51	-0.3
2,978,317	-		AO356_13090	0.51	-1.7
2,978,317	-		AO356_13090	0.51	+0.2
2,978,317	-		AO356_13090	0.51	-0.5
2,978,317	-		AO356_13090	0.51	-0.0
2,978,319	+		AO356_13090	0.51	-0.1
2,978,319	+		AO356_13090	0.51	+0.7
2,978,319	+		AO356_13090	0.51	+1.2
2,978,319	+		AO356_13090	0.51	-0.7
2,978,319	+		AO356_13090	0.51	+0.3
2,978,320	-		AO356_13090	0.52	+0.5
2,978,320	-		AO356_13090	0.52	+0.2
2,978,320	-		AO356_13090	0.52	+1.6
2,978,320	-		AO356_13090	0.52	+0.3
2,978,320	-		AO356_13090	0.52	-0.6
2,978,320	-		AO356_13090	0.52	-0.3
2,978,343	+		AO356_13090	0.53	-0.1
2,978,343	+		AO356_13090	0.53	+0.4
2,978,343	+		AO356_13090	0.53	-0.2
2,978,343	+		AO356_13090	0.53	+0.5
2,978,343	+		AO356_13090	0.53	+0.4
2,978,395	+		AO356_13090	0.57	-0.2
2,978,395	+		AO356_13090	0.57	+0.6
2,978,395	+		AO356_13090	0.57	-0.2
2,978,395	+		AO356_13090	0.57	+0.2
2,978,395	+		AO356_13090	0.57	+0.1
2,978,395	+		AO356_13090	0.57	-0.3
2,978,395	+		AO356_13090	0.57	+0.1
2,978,395	+		AO356_13090	0.57	+0.9
2,978,395	+		AO356_13090	0.57	+0.3
2,978,396	-		AO356_13090	0.57	-0.3
2,978,396	-		AO356_13090	0.57	+0.7
2,978,396	-		AO356_13090	0.57	+0.5
2,978,396	-		AO356_13090	0.57	-0.2
2,978,396	-		AO356_13090	0.57	+0.0
2,978,396	-		AO356_13090	0.57	+0.0
2,978,396	-		AO356_13090	0.57	+0.1
2,978,415	+		AO356_13090	0.59	+0.1
2,978,415	+		AO356_13090	0.59	+0.5
2,978,460	+		AO356_13090	0.62	+0.5
2,978,460	+		AO356_13090	0.62	-0.3
2,978,460	+		AO356_13090	0.62	+0.1
2,978,461	-		AO356_13090	0.62	+0.7
2,978,461	-		AO356_13090	0.62	-0.4
2,978,461	-		AO356_13090	0.62	-0.3
2,978,461	-		AO356_13090	0.62	+0.4
2,978,461	-		AO356_13090	0.62	-1.2
2,978,461	-		AO356_13090	0.62	+0.8
2,978,461	-		AO356_13090	0.62	-1.1
2,978,461	-		AO356_13090	0.62	+0.6
2,978,461	-		AO356_13090	0.62	+0.1
2,978,461	-		AO356_13090	0.62	+1.2
2,978,461	-		AO356_13090	0.62	+0.9
2,978,461	-		AO356_13090	0.62	+0.9
2,978,463	+		AO356_13090	0.62	-0.3
2,978,463	+		AO356_13090	0.62	+0.2
2,978,463	+		AO356_13090	0.62	+0.3
2,978,463	+		AO356_13090	0.62	+0.6
2,978,463	+		AO356_13090	0.62	+0.7
2,978,463	+		AO356_13090	0.62	-1.9
2,978,463	+		AO356_13090	0.62	+0.9
2,978,463	+		AO356_13090	0.62	-0.1
2,978,463	+		AO356_13090	0.62	-0.3
2,978,463	+		AO356_13090	0.62	-0.3
2,978,463	+		AO356_13090	0.62	-0.0
2,978,464	-		AO356_13090	0.62	+0.8
2,978,464	-		AO356_13090	0.62	-0.4
2,978,464	-		AO356_13090	0.62	+1.2
2,978,464	-		AO356_13090	0.62	+0.8
2,978,464	-		AO356_13090	0.62	-0.4
2,978,464	-		AO356_13090	0.62	-1.3
2,978,464	-		AO356_13090	0.62	+0.2
2,978,464	-		AO356_13090	0.62	-0.1
2,978,464	-		AO356_13090	0.62	-1.7
2,978,464	-		AO356_13090	0.62	+1.9
2,978,476	-		AO356_13090	0.63	-1.8
2,978,478	+		AO356_13090	0.63	-0.1
2,978,479	-		AO356_13090	0.64	+0.1
2,978,479	-		AO356_13090	0.64	+0.2
2,978,479	-		AO356_13090	0.64	+0.6
2,978,520	+		AO356_13090	0.67	+0.9
2,978,520	+		AO356_13090	0.67	+0.1
2,978,520	+		AO356_13090	0.67	-0.8
2,978,521	-		AO356_13090	0.67	-0.0
2,978,521	-		AO356_13090	0.67	+0.8
2,978,538	+		AO356_13090	0.68	-0.4
2,978,538	+		AO356_13090	0.68	-0.4
2,978,538	+		AO356_13090	0.68	+0.7
2,978,538	+		AO356_13090	0.68	-0.2
2,978,539	-		AO356_13090	0.68	+0.6
2,978,539	-		AO356_13090	0.68	+1.1
2,978,539	-		AO356_13090	0.68	+0.0
2,978,539	-		AO356_13090	0.68	+0.6
2,978,539	-		AO356_13090	0.68	+0.3
2,978,539	-		AO356_13090	0.68	+0.3
2,978,634	+		AO356_13090	0.75	-0.3
2,978,634	+		AO356_13090	0.75	+0.0
2,978,635	-		AO356_13090	0.75	+0.2
2,978,684	+		AO356_13090	0.79	-2.3
2,978,684	+		AO356_13090	0.79	-0.3
2,978,684	+		AO356_13090	0.79	+0.4
2,978,684	+		AO356_13090	0.79	-0.3
2,978,684	+		AO356_13090	0.79	+0.6
2,978,684	+		AO356_13090	0.79	-0.0
2,978,684	+		AO356_13090	0.79	-0.9
2,978,684	+		AO356_13090	0.79	+0.1
2,978,684	+		AO356_13090	0.79	-0.5
2,978,684	+		AO356_13090	0.79	-1.4
2,978,685	-		AO356_13090	0.79	+0.4
2,978,685	-		AO356_13090	0.79	+0.8
2,978,685	-		AO356_13090	0.79	+0.3
2,978,685	-		AO356_13090	0.79	+1.5
2,978,685	-		AO356_13090	0.79	-0.8
2,978,685	-		AO356_13090	0.79	-0.5
2,978,685	-		AO356_13090	0.79	-0.2
2,978,685	-		AO356_13090	0.79	+0.7
2,978,701	-		AO356_13090	0.80	-0.3
2,978,706	+		AO356_13090	0.81	+0.1
2,978,706	+		AO356_13090	0.81	+0.9
2,978,707	-		AO356_13090	0.81	+0.6
2,978,754	+		AO356_13090	0.84	+0.7
2,978,754	+		AO356_13090	0.84	-0.2
2,978,754	+		AO356_13090	0.84	-0.7
2,978,754	+		AO356_13090	0.84	-0.8
2,978,754	+		AO356_13090	0.84	+0.4
2,978,754	+		AO356_13090	0.84	-0.3
2,978,754	+		AO356_13090	0.84	-0.1
2,978,754	+		AO356_13090	0.84	-0.1
2,978,754	+		AO356_13090	0.84	+0.0
2,978,754	+		AO356_13090	0.84	-0.7
2,978,755	-		AO356_13090	0.84	-0.0
2,978,755	-		AO356_13090	0.84	+0.0
2,978,826	+		AO356_13090	0.90	+0.2
2,978,826	+		AO356_13090	0.90	+0.1
2,978,826	+		AO356_13090	0.90	-1.4
2,978,826	+		AO356_13090	0.90	+0.1
2,978,827	-		AO356_13090	0.90	+0.3
2,978,827	-		AO356_13090	0.90	+0.6
2,978,879	+				-0.1
2,978,880	-				-0.3
2,978,940	+				+1.0
2,978,940	+				-1.1
2,978,940	+				-1.5
2,978,941	-				+1.0
2,978,941	-				+0.7
2,978,958	+				-0.2
2,978,958	+				-1.5
2,978,959	-				-0.2
2,978,959	-				-0.4
2,978,959	-				-2.2
2,978,959	-				+0.1
2,978,959	-				-0.2
2,979,018	+				-1.0
2,979,018	+				-0.2
2,979,018	+				+1.2
2,979,046	+				+0.6
2,979,125	+				+0.3
2,979,125	+				+0.7
2,979,126	-				+0.6
2,979,126	-				+0.5
2,979,126	-				+0.4
2,979,484	+		AO356_13095	0.36	-0.4
2,979,484	+		AO356_13095	0.36	+0.4
2,979,484	+		AO356_13095	0.36	+1.3
2,979,484	+		AO356_13095	0.36	+0.0
2,979,484	+		AO356_13095	0.36	+0.4
2,979,484	+		AO356_13095	0.36	-0.2
2,979,484	+		AO356_13095	0.36	-0.1
2,979,484	+		AO356_13095	0.36	-1.4
2,979,484	+		AO356_13095	0.36	+0.1
2,979,485	-		AO356_13095	0.37	+0.6
2,979,485	-		AO356_13095	0.37	+0.2
2,979,485	-		AO356_13095	0.37	-0.0
2,979,485	-		AO356_13095	0.37	-0.1
2,979,485	-		AO356_13095	0.37	-0.5
2,979,485	-		AO356_13095	0.37	-0.3
2,979,485	-		AO356_13095	0.37	-0.3
2,979,485	-		AO356_13095	0.37	+0.7
2,979,485	-		AO356_13095	0.37	-0.2
2,979,485	-		AO356_13095	0.37	-0.4
2,979,485	-		AO356_13095	0.37	+0.1
2,979,572	+		AO356_13095	0.50	-1.1
2,979,572	+		AO356_13095	0.50	+0.1
2,979,572	+		AO356_13095	0.50	+1.0
2,979,572	+		AO356_13095	0.50	+0.1
2,979,573	-		AO356_13095	0.50	+0.2
2,979,573	-		AO356_13095	0.50	-0.3
2,979,573	-		AO356_13095	0.50	-0.8
2,979,665	+		AO356_13095	0.65	-1.6
2,979,665	+		AO356_13095	0.65	+0.3
2,979,665	+		AO356_13095	0.65	-0.1
2,979,666	-		AO356_13095	0.65	+0.1
2,979,666	-		AO356_13095	0.65	-0.2
2,979,666	-		AO356_13095	0.65	-0.6
2,979,737	+		AO356_13095	0.76	-1.0
2,979,737	+		AO356_13095	0.76	-0.3
2,979,737	+		AO356_13095	0.76	+0.0
2,979,737	+		AO356_13095	0.76	-0.3
2,979,738	-		AO356_13095	0.76	-1.4
2,979,738	-		AO356_13095	0.76	-1.0
2,979,738	-		AO356_13095	0.76	-0.9
2,979,738	-		AO356_13095	0.76	+0.2
2,979,738	-		AO356_13095	0.76	-0.4
2,979,738	-		AO356_13095	0.76	+0.7
2,979,857	+				-0.7
2,979,857	+				+1.1
2,979,857	+				+0.9
2,979,857	+				+0.2
2,979,858	-				+1.0
2,979,858	-				+0.5
2,979,858	-				+0.1
2,980,052	-				+0.1
2,980,071	-				-0.4
2,980,137	+				-0.1
2,980,137	+				-0.3
2,980,137	+				+0.7
2,980,137	+				+0.7
2,980,138	-				+0.7
2,980,138	-				+0.1
2,980,138	-				-0.3
2,980,189	+				-0.4
2,980,189	+				+0.2
2,980,190	-				+0.8
2,980,190	-				-0.2
2,980,190	-				-0.1
2,980,190	-				+0.8
2,980,190	-				-0.2
2,980,190	-				+0.7
2,980,190	-				-0.5
2,980,190	-				-0.1
2,980,199	+				-0.2
2,980,199	+				-0.3
2,980,312	+		AO356_13100	0.18	+0.1
2,980,312	+		AO356_13100	0.18	+0.6
2,980,313	-		AO356_13100	0.18	-0.2
2,980,313	-		AO356_13100	0.18	+1.5
2,980,319	+		AO356_13100	0.19	-0.3
2,980,320	-		AO356_13100	0.20	+0.8
2,980,320	-		AO356_13100	0.20	+0.9
2,980,320	-		AO356_13100	0.20	-0.0
2,980,432	+		AO356_13100	0.38	-0.2
2,980,432	+		AO356_13100	0.38	+0.7
2,980,432	+		AO356_13100	0.38	-0.5
2,980,432	+		AO356_13100	0.38	-0.8
2,980,433	-		AO356_13100	0.39	+0.1
2,980,433	-		AO356_13100	0.39	+0.4
2,980,433	-		AO356_13100	0.39	-0.3
2,980,433	-		AO356_13100	0.39	+0.1
2,980,433	-		AO356_13100	0.39	+1.7
2,980,433	-		AO356_13100	0.39	+1.1
2,980,500	+		AO356_13100	0.50	-0.3
2,980,501	-		AO356_13100	0.50	-0.7
2,980,559	-		AO356_13100	0.60	+0.1
2,980,757	+				+0.6
2,980,757	+				+1.5
2,980,757	+				-0.1
2,980,757	+				+0.5
2,980,757	+				+0.0
2,980,757	+				+0.4
2,980,757	+				+0.4
2,980,757	+				+0.3
2,980,757	+				-1.0
2,980,758	-				+1.3
2,980,758	-				-0.2
2,980,758	-				+0.5
2,980,758	-				+0.7
2,980,758	-				+0.9
2,980,826	+				-0.0
2,980,826	+				+0.4
2,980,827	-				-0.3
2,980,827	-				-0.1
2,980,827	-				+0.2