Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07615

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
1,685,223	+		AO356_07610	0.32	-0.5
1,685,224	-		AO356_07610	0.32	+0.6
1,685,224	-		AO356_07610	0.32	+0.3
1,685,224	-		AO356_07610	0.32	+1.1
1,685,224	-		AO356_07610	0.32	+0.5
1,685,238	+		AO356_07610	0.34	+1.0
1,685,238	+		AO356_07610	0.34	-0.1
1,685,238	+		AO356_07610	0.34	+0.4
1,685,239	-		AO356_07610	0.34	+0.7
1,685,502	+		AO356_07610	0.63	-0.6
1,685,502	+		AO356_07610	0.63	+1.0
1,685,502	+		AO356_07610	0.63	+0.4
1,685,502	+		AO356_07610	0.63	+0.5
1,685,502	+		AO356_07610	0.63	-0.6
1,685,502	+		AO356_07610	0.63	+0.3
1,685,502	+		AO356_07610	0.63	+0.0
1,685,502	+		AO356_07610	0.63	+0.2
1,685,503	-		AO356_07610	0.63	+0.4
1,685,503	-		AO356_07610	0.63	+0.4
1,685,503	-		AO356_07610	0.63	-0.1
1,685,503	-		AO356_07610	0.63	-0.6
1,685,503	-		AO356_07610	0.63	+0.3
1,685,589	-		AO356_07610	0.72	+0.4
1,685,789	+				+0.7
1,685,789	+				-0.8
1,685,789	+				-0.5
1,685,790	-				+0.7
1,685,877	+				+0.7
1,685,979	-				+1.1
1,686,073	+				-0.9
1,686,073	+				-0.3
1,686,073	+				-0.7
1,686,073	+				-0.7
1,686,077	+				-0.6
1,686,077	+				+0.1
1,686,077	+				+1.0
1,686,077	+				-0.0
1,686,078	-				-0.1
1,686,078	-				+0.4
1,686,122	-				+0.0
1,686,122	-				-0.7
1,686,132	+				+0.3
1,686,163	+				+1.0
1,686,163	+				-0.2
1,686,164	-				+1.7
1,686,178	+				-1.0
1,686,178	+				+0.9
1,686,179	-				+0.7
1,686,211	+				+0.4
1,686,211	+				-1.2
1,686,211	+				+0.2
1,686,211	+				+1.9
1,686,211	+				+0.3
1,686,212	-				+1.3
1,686,212	-				+0.7
1,686,212	-				-1.1
1,686,212	-				+0.3
1,686,212	-				+0.0
1,686,212	-				+1.0
1,686,299	-		AO356_07615	0.15	-0.2
1,686,335	+		AO356_07615	0.18	-1.2
1,686,335	+		AO356_07615	0.18	-0.2
1,686,336	-		AO356_07615	0.19	+0.6
1,686,336	-		AO356_07615	0.19	+0.8
1,686,336	-		AO356_07615	0.19	-0.0
1,686,385	+		AO356_07615	0.24	-0.6
1,686,385	+		AO356_07615	0.24	+0.4
1,686,385	+		AO356_07615	0.24	+1.6
1,686,385	+		AO356_07615	0.24	-0.5
1,686,386	-		AO356_07615	0.24	-0.3
1,686,595	+		AO356_07615	0.46	+0.5
1,686,598	+		AO356_07615	0.46	+1.0
1,686,598	+		AO356_07615	0.46	+0.6
1,686,598	+		AO356_07615	0.46	-0.0
1,686,598	+		AO356_07615	0.46	+1.0
1,686,599	-		AO356_07615	0.47	-0.1
1,686,599	-		AO356_07615	0.47	-0.4
1,686,709	+		AO356_07615	0.58	+0.5
1,686,709	+		AO356_07615	0.58	+0.9
1,686,709	+		AO356_07615	0.58	+0.6
1,686,709	+		AO356_07615	0.58	+1.3
1,686,709	+		AO356_07615	0.58	-0.1
1,686,709	+		AO356_07615	0.58	-0.4
1,686,709	+		AO356_07615	0.58	+0.3
1,686,709	+		AO356_07615	0.58	+1.2
1,686,710	-		AO356_07615	0.58	-0.2
1,686,710	-		AO356_07615	0.58	+0.2
1,686,710	-		AO356_07615	0.58	-0.5
1,686,710	-		AO356_07615	0.58	-0.2
1,686,710	-		AO356_07615	0.58	+0.4
1,686,710	-		AO356_07615	0.58	-0.5
1,686,710	-		AO356_07615	0.58	+0.4
1,686,799	+		AO356_07615	0.68	-0.5
1,686,800	-		AO356_07615	0.68	+0.4
1,686,800	-		AO356_07615	0.68	+0.7
1,686,874	+		AO356_07615	0.76	+0.6
1,686,874	+		AO356_07615	0.76	-0.4
1,686,874	+		AO356_07615	0.76	+0.0
1,686,874	+		AO356_07615	0.76	-0.5
1,686,874	+		AO356_07615	0.76	+0.2
1,686,875	-		AO356_07615	0.76	+0.4
1,686,875	-		AO356_07615	0.76	+0.5
1,686,889	+		AO356_07615	0.77	+0.9
1,686,890	-		AO356_07615	0.78	+0.1
1,686,895	+		AO356_07615	0.78	+1.0
1,686,895	+		AO356_07615	0.78	-0.2
1,686,895	+		AO356_07615	0.78	+0.9
1,686,895	+		AO356_07615	0.78	-0.1
1,686,895	+		AO356_07615	0.78	+0.1
1,686,895	+		AO356_07615	0.78	+0.5
1,686,896	-		AO356_07615	0.78	-0.8
1,686,896	-		AO356_07615	0.78	-1.7
1,686,896	-		AO356_07615	0.78	+0.9
1,686,896	-		AO356_07615	0.78	+0.3
1,686,896	-		AO356_07615	0.78	+0.7
1,686,896	-		AO356_07615	0.78	-0.3
1,686,958	+		AO356_07615	0.85	+1.1
1,686,958	+		AO356_07615	0.85	+0.3
1,686,958	+		AO356_07615	0.85	+0.4
1,686,959	-		AO356_07615	0.85	+0.6
1,686,959	-		AO356_07615	0.85	-0.1
1,686,959	-		AO356_07615	0.85	+0.2
1,686,959	-		AO356_07615	0.85	-0.0
1,686,959	-		AO356_07615	0.85	+0.7
1,687,030	+				+0.3
1,687,030	+				+0.8
1,687,030	+				-0.3
1,687,031	-				+0.2
1,687,031	-				+0.2
1,687,031	-				-0.5
1,687,352	+		AO356_07620	0.27	-0.3
1,687,353	-		AO356_07620	0.28	-0.1
1,687,479	+		AO356_07620	0.43	-1.0
1,687,479	+		AO356_07620	0.43	-0.2
1,687,479	+		AO356_07620	0.43	-0.2
1,687,480	-		AO356_07620	0.43	-0.2
1,687,480	-		AO356_07620	0.43	+1.8
1,687,508	+		AO356_07620	0.46	-0.5
1,687,509	-		AO356_07620	0.46	-0.2
1,687,509	-		AO356_07620	0.46	+0.6
1,687,714	+		AO356_07620	0.71	-0.4
1,687,714	+		AO356_07620	0.71	-0.0
1,687,715	-		AO356_07620	0.71	-0.3
1,687,936	+				-1.3
1,687,936	+				-0.2
1,687,937	-				+0.3
1,687,970	+				+0.0
1,687,970	+				-1.0
1,687,970	+				+0.2
1,687,971	-				-0.6
1,688,015	+				-0.4
1,688,015	+				+1.0
1,688,015	+				+0.6
1,688,042	+				+0.5
1,688,042	+				-0.3
1,688,043	-				-0.3
1,688,043	-				-0.2
1,688,043	-				+0.4
1,688,043	-				+0.2
1,688,048	+				+0.5
1,688,060	+				+0.1
1,688,060	+				+0.7
1,688,060	+				-0.7
1,688,061	-				+0.1
1,688,061	-				-1.4
1,688,061	-				+0.1
1,688,062	+				-0.3
1,688,063	-				-0.8