Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05480

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
1,225,554	+				+0.4
1,225,554	+				-0.1
1,225,554	+				+0.9
1,225,554	+				+0.0
1,225,555	-				+0.4
1,225,555	-				+1.3
1,225,652	+				-0.2
1,225,652	+				+1.7
1,225,652	+				+0.8
1,225,652	+				+2.3
1,225,652	+				-1.3
1,225,652	+				-0.7
1,225,652	+				-1.0
1,225,652	+				-0.4
1,225,652	+				-0.7
1,225,652	+				+0.9
1,225,652	+				-0.7
1,225,652	+				-0.1
1,225,653	-				-0.1
1,225,653	-				+0.5
1,225,653	-				-0.1
1,225,653	-				-0.4
1,225,653	-				-0.3
1,225,653	-				+0.6
1,225,653	-				-0.2
1,225,656	+				+0.4
1,225,656	+				-1.5
1,225,701	+				+0.2
1,225,701	+				-0.3
1,225,701	+				-0.7
1,225,701	+				-0.8
1,225,702	-				-0.1
1,225,767	+		AO356_05475	0.20	+0.3
1,225,767	+		AO356_05475	0.20	+0.7
1,225,767	+		AO356_05475	0.20	+0.1
1,225,767	+		AO356_05475	0.20	+1.0
1,225,767	+		AO356_05475	0.20	-0.1
1,225,768	-		AO356_05475	0.20	+1.7
1,225,768	-		AO356_05475	0.20	+0.4
1,225,768	-		AO356_05475	0.20	-0.1
1,226,207	+				+0.4
1,226,207	+				+0.7
1,226,207	+				-0.3
1,226,208	-				+0.8
1,226,208	-				+0.4
1,226,208	-				+0.4
1,226,241	+				+0.4
1,226,241	+				+0.6
1,226,241	+				+0.2
1,226,241	+				+0.6
1,226,241	+				-0.8
1,226,241	+				+0.5
1,226,241	+				+0.8
1,226,241	+				+0.6
1,226,242	-				-0.3
1,226,242	-				+0.1
1,226,242	-				-0.3
1,226,242	-				+1.3
1,226,242	-				-0.2
1,226,242	-				+1.5
1,226,242	-				+0.7
1,226,335	+				+0.3
1,226,335	+				-0.5
1,226,336	-				+0.8
1,226,336	-				+0.3
1,226,379	+				+0.1
1,226,379	+				+0.5
1,226,380	-				+0.0
1,226,380	-				-0.8
1,226,388	+				+0.4
1,226,389	-				+0.7
1,226,389	-				+0.4
1,226,440	+				-0.4
1,226,440	+				+0.4
1,226,441	-				-0.6
1,226,657	+				+1.0
1,226,657	+				-0.3
1,226,657	+				-0.7
1,226,658	-				+1.1
1,226,658	-				-0.5
1,226,658	-				+0.0
1,226,677	+		AO356_05480	0.10	+0.3
1,226,677	+		AO356_05480	0.10	+0.6
1,226,677	+		AO356_05480	0.10	+0.4
1,226,762	+		AO356_05480	0.14	+0.9
1,226,762	+		AO356_05480	0.14	+1.1
1,226,762	+		AO356_05480	0.14	-0.9
1,226,804	+		AO356_05480	0.16	+0.6
1,226,804	+		AO356_05480	0.16	+1.1
1,226,804	+		AO356_05480	0.16	+0.1
1,226,804	+		AO356_05480	0.16	+0.0
1,226,804	+		AO356_05480	0.16	+1.0
1,226,804	+		AO356_05480	0.16	-0.5
1,226,804	+		AO356_05480	0.16	-0.2
1,226,804	+		AO356_05480	0.16	+0.9
1,226,805	-		AO356_05480	0.16	+0.3
1,226,805	-		AO356_05480	0.16	+1.4
1,226,805	-		AO356_05480	0.16	+1.2
1,226,846	+		AO356_05480	0.17	-1.4
1,226,846	+		AO356_05480	0.17	-0.4
1,226,846	+		AO356_05480	0.17	+1.3
1,226,846	+		AO356_05480	0.17	+0.7
1,226,846	+		AO356_05480	0.17	+0.2
1,226,846	+		AO356_05480	0.17	-1.0
1,226,847	-		AO356_05480	0.17	+0.4
1,226,847	-		AO356_05480	0.17	+0.3
1,226,847	-		AO356_05480	0.17	+1.5
1,226,868	-		AO356_05480	0.18	-0.2
1,226,868	-		AO356_05480	0.18	+0.4
1,226,868	-		AO356_05480	0.18	+1.3
1,226,868	-		AO356_05480	0.18	-0.2
1,226,868	-		AO356_05480	0.18	+0.9
1,226,868	-		AO356_05480	0.18	+0.5
1,226,868	-		AO356_05480	0.18	+0.5
1,226,930	+		AO356_05480	0.21	+0.6
1,227,414	+		AO356_05480	0.40	+0.2
1,227,476	+		AO356_05480	0.43	-0.3
1,227,476	+		AO356_05480	0.43	+0.6
1,227,524	+		AO356_05480	0.45	+0.0
1,227,524	+		AO356_05480	0.45	+1.1
1,227,524	+		AO356_05480	0.45	+0.1
1,227,524	+		AO356_05480	0.45	+0.1
1,227,524	+		AO356_05480	0.45	+0.2
1,227,525	-		AO356_05480	0.45	+0.3
1,227,525	-		AO356_05480	0.45	+1.4
1,227,860	+		AO356_05480	0.59	-0.2
1,227,900	-		AO356_05480	0.60	+0.2
1,227,962	+		AO356_05480	0.63	-0.5
1,228,070	+		AO356_05480	0.67	-0.2
1,228,196	+		AO356_05480	0.72	+0.4
1,228,196	+		AO356_05480	0.72	-0.1
1,228,197	-		AO356_05480	0.72	-0.2
1,228,197	-		AO356_05480	0.72	-0.1
1,228,256	+		AO356_05480	0.75	+1.0
1,228,256	+		AO356_05480	0.75	+0.0
1,228,257	-		AO356_05480	0.75	-0.1
1,228,257	-		AO356_05480	0.75	+0.1
1,228,257	-		AO356_05480	0.75	+0.5
1,228,257	-		AO356_05480	0.75	+1.0
1,228,257	-		AO356_05480	0.75	+0.9
1,228,257	-		AO356_05480	0.75	+0.5
1,228,361	+		AO356_05480	0.79	+0.6
1,228,544	+		AO356_05480	0.87	+0.8
1,228,544	+		AO356_05480	0.87	+0.9
1,228,545	-		AO356_05480	0.87	+1.0
1,228,575	+		AO356_05480	0.88	-0.5
1,228,575	+		AO356_05480	0.88	+1.1
1,228,575	+		AO356_05480	0.88	+0.5
1,228,576	-		AO356_05480	0.88	+0.1
1,228,576	-		AO356_05480	0.88	-0.1
1,228,678	+				-0.0
1,228,678	+				-0.6
1,228,757	+				+1.0
1,228,758	-				+0.2
1,228,758	-				-0.2
1,228,758	-				-0.0
1,228,758	-				-0.3
1,228,793	+				+0.7
1,228,794	-				+0.4
1,228,871	+				-1.2
1,228,871	+				-0.6
1,228,871	+				-0.3
1,228,872	-				+0.9
1,228,872	-				-0.3
1,228,894	+				+0.1
1,228,894	+				+0.6
1,228,895	-				+0.5
1,228,895	-				+0.1
1,228,895	-				+0.1
1,228,895	-				-1.2
1,228,898	-				-0.9
1,228,898	-				-0.4
1,228,898	-				-0.3
1,228,898	-				-0.3
1,228,898	-				+0.2
1,228,898	-				-0.2
1,228,898	-				-0.7
1,228,898	-				+0.3
1,228,898	-				+1.1
1,228,898	-				+1.0
1,228,953	+				+1.8
1,228,953	+				-0.2
1,229,041	+				-0.4
1,229,042	-				+0.5
1,229,077	+				-0.1
1,229,078	-				-0.3
1,229,078	-				-0.0
1,229,142	-				+0.3
1,229,142	-				-0.2
1,229,142	-				+0.8
1,229,162	+				+1.0
1,229,162	+				+0.6
1,229,163	-				+0.1
1,229,163	-				+0.2
1,229,243	+		AO356_05485	0.13	+0.7
1,229,243	+		AO356_05485	0.13	+0.8
1,229,243	+		AO356_05485	0.13	+0.0
1,229,243	+		AO356_05485	0.13	-0.7
1,229,244	-		AO356_05485	0.13	-0.5
1,229,244	-		AO356_05485	0.13	+1.2
1,229,244	-		AO356_05485	0.13	+0.1
1,229,244	-		AO356_05485	0.13	-0.4
1,229,346	+		AO356_05485	0.23	+0.4
1,229,346	+		AO356_05485	0.23	-0.9
1,229,346	+		AO356_05485	0.23	+0.6
1,229,395	-		AO356_05485	0.28	+0.1
1,229,395	-		AO356_05485	0.28	+0.0
1,229,438	+		AO356_05485	0.32	-0.7
1,229,438	+		AO356_05485	0.32	-0.0
1,229,439	-		AO356_05485	0.32	-0.3
1,229,439	-		AO356_05485	0.32	-0.3
1,229,491	+		AO356_05485	0.37	-0.1
1,229,491	+		AO356_05485	0.37	-0.8
1,229,492	-		AO356_05485	0.37	-0.1
1,229,492	-		AO356_05485	0.37	+0.7
1,229,528	+		AO356_05485	0.41	+0.1
1,229,528	+		AO356_05485	0.41	+0.1
1,229,621	+		AO356_05485	0.50	+1.9
1,229,622	-		AO356_05485	0.50	+0.8
1,229,622	-		AO356_05485	0.50	+0.6
1,229,622	-		AO356_05485	0.50	+0.7
1,229,718	-		AO356_05485	0.59	+0.7
1,229,753	+		AO356_05485	0.62	+0.2
1,229,753	+		AO356_05485	0.62	-1.0
1,229,753	+		AO356_05485	0.62	+1.5
1,229,753	+		AO356_05485	0.62	+0.2
1,229,753	+		AO356_05485	0.62	+1.8
1,229,754	-		AO356_05485	0.63	-0.3
1,229,754	-		AO356_05485	0.63	+0.5
1,229,754	-		AO356_05485	0.63	+0.1
1,229,754	-		AO356_05485	0.63	+0.7
1,229,754	-		AO356_05485	0.63	+1.1
1,229,754	-		AO356_05485	0.63	+0.4
1,229,855	+		AO356_05485	0.72	-0.6