Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15145

Experiment: Minimal media pH6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH6
3,347,899	+		AO353_15140	0.15	+0.7
3,347,899	+		AO353_15140	0.15	-0.1
3,347,900	-		AO353_15140	0.15	+0.5
3,347,900	-		AO353_15140	0.15	+0.1
3,347,900	-		AO353_15140	0.15	+0.2
3,347,901	+		AO353_15140	0.15	+1.1
3,347,901	+		AO353_15140	0.15	+0.1
3,347,902	-		AO353_15140	0.15	+0.2
3,347,902	-		AO353_15140	0.15	+1.6
3,347,929	+		AO353_15140	0.18	+0.7
3,347,929	+		AO353_15140	0.18	+0.5
3,347,929	+		AO353_15140	0.18	+0.1
3,347,930	-		AO353_15140	0.18	-0.0
3,347,930	-		AO353_15140	0.18	+0.2
3,347,959	-		AO353_15140	0.20	+1.9
3,347,959	-		AO353_15140	0.20	+0.1
3,347,984	+		AO353_15140	0.23	-0.3
3,348,041	+		AO353_15140	0.27	+0.9
3,348,041	+		AO353_15140	0.27	-0.9
3,348,041	+		AO353_15140	0.27	-0.7
3,348,042	-		AO353_15140	0.27	+1.3
3,348,205	+		AO353_15140	0.41	+3.7
3,348,205	+		AO353_15140	0.41	-1.1
3,348,205	+		AO353_15140	0.41	-0.3
3,348,205	+		AO353_15140	0.41	+0.4
3,348,205	+		AO353_15140	0.41	+0.8
3,348,205	+		AO353_15140	0.41	-0.4
3,348,205	+		AO353_15140	0.41	-0.3
3,348,205	+		AO353_15140	0.41	+0.2
3,348,205	+		AO353_15140	0.41	-0.6
3,348,205	+		AO353_15140	0.41	-0.8
3,348,205	+		AO353_15140	0.41	+2.1
3,348,205	+		AO353_15140	0.41	+0.4
3,348,205	+		AO353_15140	0.41	+0.1
3,348,205	+		AO353_15140	0.41	-0.1
3,348,206	-		AO353_15140	0.42	+0.7
3,348,206	-		AO353_15140	0.42	+0.0
3,348,206	-		AO353_15140	0.42	+2.0
3,348,206	-		AO353_15140	0.42	+0.6
3,348,206	-		AO353_15140	0.42	+0.5
3,348,206	-		AO353_15140	0.42	+1.2
3,348,206	-				-0.2
3,348,206	-		AO353_15140	0.42	+1.3
3,348,206	-		AO353_15140	0.42	+0.3
3,348,207	+		AO353_15140	0.42	+0.5
3,348,207	+		AO353_15140	0.42	-0.8
3,348,208	-		AO353_15140	0.42	+0.1
3,348,208	-		AO353_15140	0.42	-0.2
3,348,208	-		AO353_15140	0.42	+1.1
3,348,212	+		AO353_15140	0.42	-0.9
3,348,212	+		AO353_15140	0.42	+0.3
3,348,212	+		AO353_15140	0.42	-0.4
3,348,212	+		AO353_15140	0.42	+2.1
3,348,212	+		AO353_15140	0.42	-0.3
3,348,212	+		AO353_15140	0.42	+0.3
3,348,212	+		AO353_15140	0.42	+1.0
3,348,212	+		AO353_15140	0.42	-0.4
3,348,213	-		AO353_15140	0.42	+1.6
3,348,213	-		AO353_15140	0.42	-0.5
3,348,213	-		AO353_15140	0.42	+0.1
3,348,213	-		AO353_15140	0.42	+0.9
3,348,330	+		AO353_15140	0.52	-1.0
3,348,363	-		AO353_15140	0.55	-2.2
3,348,363	-		AO353_15140	0.55	+1.2
3,348,422	+		AO353_15140	0.60	+2.5
3,348,422	+		AO353_15140	0.60	-1.5
3,348,422	+		AO353_15140	0.60	+1.1
3,348,422	+		AO353_15140	0.60	-1.3
3,348,453	+		AO353_15140	0.63	+0.8
3,348,454	-		AO353_15140	0.63	+0.4
3,348,454	-		AO353_15140	0.63	-0.5
3,348,463	+		AO353_15140	0.64	-0.5
3,348,463	+		AO353_15140	0.64	-0.2
3,348,463	+		AO353_15140	0.64	-0.5
3,348,463	+		AO353_15140	0.64	+1.0
3,348,463	+		AO353_15140	0.64	+0.5
3,348,464	-		AO353_15140	0.64	-0.5
3,348,557	+		AO353_15140	0.72	-0.8
3,348,557	+		AO353_15140	0.72	+0.7
3,348,557	+		AO353_15140	0.72	+0.5
3,348,557	+		AO353_15140	0.72	+1.4
3,348,558	-				+0.8
3,348,641	+		AO353_15140	0.79	-0.8
3,348,673	+		AO353_15140	0.82	+1.1
3,348,673	+		AO353_15140	0.82	+0.7
3,348,674	-		AO353_15140	0.82	+1.5
3,348,674	-		AO353_15140	0.82	+0.3
3,348,674	-		AO353_15140	0.82	+0.4
3,348,674	-		AO353_15140	0.82	+1.6
3,348,795	+				-0.5
3,348,795	+				+0.1
3,348,796	-				+0.6
3,348,796	-				+0.8
3,348,796	-				-1.5
3,348,796	-				+1.2
3,348,826	+				+1.4
3,348,826	+				+2.0
3,348,826	+				-0.2
3,348,826	+				+0.8
3,348,827	-				+1.3
3,348,827	-				+0.2
3,348,827	-				+0.6
3,348,827	-				-0.3
3,348,830	+				-1.0
3,348,830	+				-1.9
3,348,830	+				-0.1
3,348,830	+				-0.2
3,348,830	+				+1.5
3,348,830	+				+1.8
3,348,830	+				-0.1
3,348,830	+				-0.7
3,348,831	-				+0.5
3,348,831	-				-1.8
3,348,831	-				+0.9
3,348,831	-				+1.5
3,348,831	-				-0.2
3,348,852	+				+0.2
3,348,853	-				+0.3
3,348,876	+				+0.3
3,348,877	-				-0.5
3,348,877	-				+1.0
3,348,883	+				+0.8
3,348,883	+				+0.0
3,348,937	+				+0.0
3,348,937	+				-0.2
3,348,937	+				-2.1
3,348,937	+				-0.1
3,348,937	+				+1.1
3,348,937	+				-0.8
3,348,937	+				-0.0
3,348,938	-				+0.4
3,348,938	-				-0.4
3,348,938	-				+0.4
3,348,938	-				+0.7
3,348,938	-				-0.3
3,348,938	-				+0.2
3,348,938	-				-0.9
3,348,938	-				+1.7
3,348,938	-				-1.0
3,348,985	+				+1.0
3,348,986	-				-0.7
3,348,994	+				-0.5
3,348,994	+				-1.2
3,348,995	-				+0.7
3,348,995	-				+0.8
3,348,995	-				+0.3
3,348,995	-				+0.6
3,349,007	+				+0.5
3,349,007	+				-0.9
3,349,007	+				-0.1
3,349,007	+				+0.5
3,349,007	+				-1.4
3,349,008	-				-2.2
3,349,008	-				+0.9
3,349,008	-				+0.6
3,349,008	-				+1.0
3,349,008	-				+2.1
3,349,038	-		AO353_15145	0.12	+0.9
3,349,038	-		AO353_15145	0.12	+1.1
3,349,038	-		AO353_15145	0.12	+2.2
3,349,048	+		AO353_15145	0.13	-0.8
3,349,048	+		AO353_15145	0.13	+1.5
3,349,049	-		AO353_15145	0.13	+0.8
3,349,049	-		AO353_15145	0.13	+0.6
3,349,049	-		AO353_15145	0.13	-0.3
3,349,049	-		AO353_15145	0.13	+0.1
3,349,206	-		AO353_15145	0.26	+0.1
3,349,223	+		AO353_15145	0.28	+0.6
3,349,224	-		AO353_15145	0.28	+0.5
3,349,224	-		AO353_15145	0.28	+0.7
3,349,224	-		AO353_15145	0.28	+0.6
3,349,224	-		AO353_15145	0.28	-1.0
3,349,337	+		AO353_15145	0.37	+1.2
3,349,387	+		AO353_15145	0.41	+2.4
3,349,387	+		AO353_15145	0.41	+0.3
3,349,387	+		AO353_15145	0.41	-0.3
3,349,387	+		AO353_15145	0.41	+0.7
3,349,387	+		AO353_15145	0.41	+1.5
3,349,387	+		AO353_15145	0.41	-0.8
3,349,387	+		AO353_15145	0.41	+1.0
3,349,387	+		AO353_15145	0.41	+0.5
3,349,387	+		AO353_15145	0.41	-0.0
3,349,387	+		AO353_15145	0.41	-0.4
3,349,388	-		AO353_15145	0.41	+0.5
3,349,388	-		AO353_15145	0.41	+1.0
3,349,388	-		AO353_15145	0.41	+0.7
3,349,388	-		AO353_15145	0.41	+0.5
3,349,388	-		AO353_15145	0.41	+1.2
3,349,388	-		AO353_15145	0.41	+0.4
3,349,388	-		AO353_15145	0.41	-0.5
3,349,389	+		AO353_15145	0.41	+2.4
3,349,390	-		AO353_15145	0.41	+0.1
3,349,453	+		AO353_15145	0.47	-0.4
3,349,453	+		AO353_15145	0.47	-0.9
3,349,453	+		AO353_15145	0.47	-1.6
3,349,453	+		AO353_15145	0.47	+0.2
3,349,453	+		AO353_15145	0.47	+0.3
3,349,453	+		AO353_15145	0.47	-0.5
3,349,454	-		AO353_15145	0.47	+0.4
3,349,454	-		AO353_15145	0.47	+1.3
3,349,454	-		AO353_15145	0.47	+0.1
3,349,454	-		AO353_15145	0.47	-0.4
3,349,454	-		AO353_15145	0.47	-1.5
3,349,454	-		AO353_15145	0.47	+0.5
3,349,454	-		AO353_15145	0.47	+1.1
3,349,454	-		AO353_15145	0.47	+0.1
3,349,462	-		AO353_15145	0.47	+0.3
3,349,881	+		AO353_15145	0.82	+1.6
3,349,881	+		AO353_15145	0.82	+0.8
3,349,882	-		AO353_15145	0.82	-0.1
3,349,882	-		AO353_15145	0.82	+0.9
3,349,919	-		AO353_15145	0.85	-0.4
3,349,919	-		AO353_15145	0.85	-0.7
3,349,919	-		AO353_15145	0.85	+1.3
3,349,974	+				+0.8
3,349,974	+				-1.8
3,349,974	+				-0.8
3,349,974	+				-0.5
3,349,974	+				-0.1
3,349,974	+				-0.7
3,349,974	+				-0.8
3,349,974	+				-2.1
3,349,975	-				-0.2
3,349,975	-				+0.1
3,349,975	-				+0.8
3,349,975	-				+2.0
3,349,975	-				-1.2
3,349,975	-				-0.5
3,349,975	-				+0.3
3,350,016	-				+1.3
3,350,131	-				+1.5
3,350,131	-				-1.9
3,350,131	-				-1.4
3,350,131	-				-0.0
3,350,170	+				-0.3
3,350,170	+				-1.0
3,350,170	+				-0.3
3,350,170	+				+0.5
3,350,171	-				+0.8
3,350,171	-				+1.4
3,350,171	-				+1.6
3,350,171	-				+0.2
3,350,171	-				+0.0
3,350,171	-				+0.5
3,350,171	-				+0.5
3,350,259	+		AO353_15150	0.21	+1.0
3,350,259	+		AO353_15150	0.21	-0.7
3,350,259	+		AO353_15150	0.21	+0.8
3,350,259	+		AO353_15150	0.21	+0.6
3,350,259	+		AO353_15150	0.21	-0.2
3,350,259	+		AO353_15150	0.21	+0.1
3,350,259	+		AO353_15150	0.21	+0.3
3,350,259	+		AO353_15150	0.21	+0.8
3,350,259	+		AO353_15150	0.21	-1.7
3,350,259	+		AO353_15150	0.21	+1.6
3,350,260	-		AO353_15150	0.21	+0.6
3,350,260	-		AO353_15150	0.21	-0.5
3,350,260	-		AO353_15150	0.21	+1.2
3,350,260	-		AO353_15150	0.21	+0.8
3,350,260	-		AO353_15150	0.21	-0.0
3,350,260	-		AO353_15150	0.21	+0.6
3,350,262	-		AO353_15150	0.21	-0.2
3,350,262	-		AO353_15150	0.21	-0.4
3,350,269	-		AO353_15150	0.22	-0.7
3,350,269	-		AO353_15150	0.22	+0.3
3,350,269	-		AO353_15150	0.22	+1.5
3,350,316	+		AO353_15150	0.28	-2.2
3,350,316	+		AO353_15150	0.28	-2.1
3,350,316	+		AO353_15150	0.28	+0.2
3,350,316	+		AO353_15150	0.28	-1.1
3,350,317	-		AO353_15150	0.28	-0.0
3,350,317	-		AO353_15150	0.28	+0.9
3,350,317	-		AO353_15150	0.28	+1.0
3,350,317	-		AO353_15150	0.28	-0.0
3,350,317	-		AO353_15150	0.28	-0.5
3,350,317	-		AO353_15150	0.28	-0.4
3,350,317	-		AO353_15150	0.28	+0.7
3,350,317	-		AO353_15150	0.28	+0.2
3,350,317	-		AO353_15150	0.28	+1.4
3,350,317	-		AO353_15150	0.28	-0.0
3,350,318	+		AO353_15150	0.28	+0.3
3,350,318	+		AO353_15150	0.28	-0.6
3,350,318	+		AO353_15150	0.28	-1.5
3,350,318	+		AO353_15150	0.28	+0.9
3,350,318	+		AO353_15150	0.28	+1.8
3,350,318	+		AO353_15150	0.28	-0.7
3,350,318	+		AO353_15150	0.28	-1.5
3,350,318	+		AO353_15150	0.28	+1.4
3,350,318	+		AO353_15150	0.28	+0.3
3,350,318	+		AO353_15150	0.28	+1.8
3,350,318	+		AO353_15150	0.28	+0.1
3,350,318	+		AO353_15150	0.28	-1.7
3,350,318	+		AO353_15150	0.28	+0.0
3,350,318	+		AO353_15150	0.28	+0.1
3,350,319	-		AO353_15150	0.28	+0.7
3,350,319	-		AO353_15150	0.28	+2.3
3,350,319	-		AO353_15150	0.28	+2.2
3,350,319	-		AO353_15150	0.28	+0.6
3,350,319	-		AO353_15150	0.28	+0.2
3,350,319	-		AO353_15150	0.28	+0.9
3,350,319	-		AO353_15150	0.28	+1.0
3,350,319	-		AO353_15150	0.28	+2.1
3,350,319	-		AO353_15150	0.28	-0.3
3,350,319	-		AO353_15150	0.28	+0.0
3,350,319	-		AO353_15150	0.28	+0.5
3,350,319	-		AO353_15150	0.28	+0.7
3,350,319	-		AO353_15150	0.28	+0.8
3,350,319	-		AO353_15150	0.28	+3.0
3,350,341	+		AO353_15150	0.31	-1.9
3,350,341	+		AO353_15150	0.31	+0.6
3,350,342	-		AO353_15150	0.31	+1.8
3,350,342	-		AO353_15150	0.31	+0.5
3,350,342	-		AO353_15150	0.31	-0.1
3,350,342	-		AO353_15150	0.31	+1.0
3,350,342	-		AO353_15150	0.31	-0.0
3,350,396	+		AO353_15150	0.38	+0.3
3,350,633	+		AO353_15150	0.68	-1.0
3,350,634	-		AO353_15150	0.68	-0.5
3,350,822	-				-0.6
3,350,886	+				+0.6
3,350,886	+				-1.7
3,350,886	+				-0.1
3,350,886	+				-1.5
3,350,886	+				+0.2
3,350,887	-				-0.8
3,350,887	-				+1.6
3,350,908	+				+0.5
3,350,909	-				+0.5
3,350,909	-				-0.5
3,350,924	+				+1.8
3,350,924	+				+0.7
3,350,925	-				+1.6
3,350,925	-				+0.4