Experiment: antimonate 0.005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_733 and Pf6N2E2_734 are separated by 25 nucleotides Pf6N2E2_734 and Pf6N2E2_735 are separated by 277 nucleotides
Pf6N2E2_733 - Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8), at 840,991 to 841,959
_733
Pf6N2E2_734 - Molybdenum cofactor biosynthesis protein MoaA, at 841,985 to 842,977
_734
Pf6N2E2_735 - Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2), at 843,255 to 845,270
_735
Position (kb) 841
842
843 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 841.246 kb on + strand, within Pf6N2E2_733 at 841.247 kb on - strand, within Pf6N2E2_733 at 841.454 kb on - strand, within Pf6N2E2_733 at 841.454 kb on - strand, within Pf6N2E2_733 at 841.454 kb on - strand, within Pf6N2E2_733 at 841.882 kb on + strand at 842.073 kb on - strand at 842.517 kb on - strand, within Pf6N2E2_734 at 842.684 kb on + strand, within Pf6N2E2_734 at 842.684 kb on + strand, within Pf6N2E2_734 at 842.684 kb on + strand, within Pf6N2E2_734 at 842.685 kb on - strand, within Pf6N2E2_734 at 842.975 kb on + strand at 842.981 kb on + strand at 842.981 kb on + strand at 842.981 kb on + strand at 842.981 kb on + strand at 843.088 kb on + strand at 843.088 kb on + strand at 843.088 kb on + strand at 843.088 kb on + strand at 843.089 kb on - strand at 843.128 kb on - strand at 843.128 kb on - strand at 843.233 kb on - strand at 843.234 kb on + strand at 843.234 kb on + strand at 843.235 kb on - strand at 843.235 kb on - strand at 843.235 kb on - strand at 843.238 kb on + strand at 843.238 kb on + strand at 843.238 kb on + strand at 843.238 kb on + strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.239 kb on - strand at 843.285 kb on - strand at 843.519 kb on + strand, within Pf6N2E2_735 at 843.519 kb on + strand, within Pf6N2E2_735 at 843.519 kb on + strand, within Pf6N2E2_735 at 843.520 kb on - strand, within Pf6N2E2_735 at 843.520 kb on - strand, within Pf6N2E2_735 at 843.648 kb on + strand, within Pf6N2E2_735 at 843.676 kb on + strand, within Pf6N2E2_735 at 843.699 kb on + strand, within Pf6N2E2_735 at 843.699 kb on + strand, within Pf6N2E2_735 at 843.699 kb on + strand, within Pf6N2E2_735 at 843.700 kb on - strand, within Pf6N2E2_735 at 843.717 kb on + strand, within Pf6N2E2_735 at 843.717 kb on + strand, within Pf6N2E2_735 at 843.718 kb on - strand, within Pf6N2E2_735 at 843.718 kb on - strand, within Pf6N2E2_735 at 843.762 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735 at 843.967 kb on - strand, within Pf6N2E2_735
Per-strain Table
Position Strand Gene LocusTag Fraction antimonate 0.005 M remove 841,246 + Pf6N2E2_733 0.26 -3.3 841,247 - Pf6N2E2_733 0.26 +0.3 841,454 - Pf6N2E2_733 0.48 +0.7 841,454 - Pf6N2E2_733 0.48 +0.5 841,454 - Pf6N2E2_733 0.48 -1.9 841,882 + -0.0 842,073 - +1.3 842,517 - Pf6N2E2_734 0.54 -0.8 842,684 + Pf6N2E2_734 0.70 -1.3 842,684 + Pf6N2E2_734 0.70 -0.2 842,684 + Pf6N2E2_734 0.70 -0.3 842,685 - Pf6N2E2_734 0.70 -0.4 842,975 + +0.3 842,981 + +0.2 842,981 + -1.3 842,981 + -0.3 842,981 + -0.4 843,088 + +0.5 843,088 + -0.4 843,088 + -0.1 843,088 + -0.1 843,089 - -0.1 843,128 - -0.3 843,128 - -1.4 843,233 - -0.2 843,234 + +1.8 843,234 + -0.1 843,235 - +0.8 843,235 - -0.1 843,235 - +0.2 843,238 + -0.7 843,238 + +0.2 843,238 + -1.6 843,238 + +1.1 843,239 - +0.8 843,239 - +0.9 843,239 - -1.6 843,239 - -0.5 843,239 - -1.3 843,239 - +1.5 843,285 - +1.0 843,519 + Pf6N2E2_735 0.13 -1.1 843,519 + Pf6N2E2_735 0.13 +0.2 843,519 + Pf6N2E2_735 0.13 +0.5 843,520 - Pf6N2E2_735 0.13 -0.5 843,520 - Pf6N2E2_735 0.13 -0.8 843,648 + Pf6N2E2_735 0.19 -1.0 843,676 + Pf6N2E2_735 0.21 -0.5 843,699 + Pf6N2E2_735 0.22 -0.6 843,699 + Pf6N2E2_735 0.22 -0.2 843,699 + Pf6N2E2_735 0.22 +0.3 843,700 - Pf6N2E2_735 0.22 -0.6 843,717 + Pf6N2E2_735 0.23 +0.6 843,717 + Pf6N2E2_735 0.23 +0.0 843,718 - Pf6N2E2_735 0.23 -0.2 843,718 - Pf6N2E2_735 0.23 +0.9 843,762 - Pf6N2E2_735 0.25 +0.4 843,967 - Pf6N2E2_735 0.35 -0.2 843,967 - Pf6N2E2_735 0.35 +0.6 843,967 - Pf6N2E2_735 0.35 +1.6 843,967 - Pf6N2E2_735 0.35 -1.0 843,967 - Pf6N2E2_735 0.35 +1.9
Or see this region's nucleotide sequence