Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4088

Experiment: antimonate 0.005 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	antimonate 0.005 M
4,764,887	-		Pf6N2E2_4087	0.28	-1.6
4,764,887	-		Pf6N2E2_4087	0.28	-0.9
4,764,887	-		Pf6N2E2_4087	0.28	-2.7
4,764,918	+		Pf6N2E2_4087	0.31	-1.2
4,764,918	+		Pf6N2E2_4087	0.31	-0.5
4,764,919	-		Pf6N2E2_4087	0.31	-0.6
4,764,919	-		Pf6N2E2_4087	0.31	-0.6
4,764,919	-		Pf6N2E2_4087	0.31	-0.5
4,765,001	-		Pf6N2E2_4087	0.39	-1.1
4,765,080	+		Pf6N2E2_4087	0.47	-1.4
4,765,080	+		Pf6N2E2_4087	0.47	-1.8
4,765,080	+		Pf6N2E2_4087	0.47	-0.5
4,765,080	+		Pf6N2E2_4087	0.47	+0.2
4,765,080	+		Pf6N2E2_4087	0.47	+0.7
4,765,080	+		Pf6N2E2_4087	0.47	-0.4
4,765,081	-		Pf6N2E2_4087	0.47	-0.6
4,765,081	-		Pf6N2E2_4087	0.47	-2.5
4,765,209	+		Pf6N2E2_4087	0.60	-3.1
4,765,209	+		Pf6N2E2_4087	0.60	-2.1
4,765,210	-		Pf6N2E2_4087	0.60	-1.5
4,765,210	-		Pf6N2E2_4087	0.60	-1.8
4,765,210	-		Pf6N2E2_4087	0.60	-1.3
4,765,327	-		Pf6N2E2_4087	0.71	-0.3
4,765,453	-		Pf6N2E2_4087	0.84	-1.5
4,765,486	+		Pf6N2E2_4087	0.87	-1.1
4,765,487	-		Pf6N2E2_4087	0.87	-2.1
4,765,487	-		Pf6N2E2_4087	0.87	-0.3
4,765,739	+				+1.6
4,765,739	+				+0.7
4,765,740	-				-1.6
4,765,740	-				+0.9
4,765,758	+				+0.9
4,765,758	+				+0.6
4,765,758	+				-2.5
4,765,759	-				+0.4
4,765,759	-				-0.9
4,765,760	+				+0.4
4,765,760	+				+1.0
4,765,760	+				-0.2
4,765,760	+				+0.7
4,765,760	+				+0.2
4,765,760	+				+0.2
4,765,760	+				-3.1
4,765,760	+				-0.1
4,765,761	-				+0.5
4,765,761	-				-3.0
4,765,761	-				-0.0
4,765,761	-				-0.6
4,765,761	-				+0.6
4,765,845	-				-2.1
4,765,857	+				+0.4
4,765,857	+				-0.3
4,765,857	+				-0.2
4,765,858	-				-2.7
4,765,858	-				+0.6
4,766,050	+		Pf6N2E2_4088	0.25	-2.4
4,766,075	+		Pf6N2E2_4088	0.28	+0.6
4,766,075	+		Pf6N2E2_4088	0.28	+0.4
4,766,075	+		Pf6N2E2_4088	0.28	-0.2
4,766,075	+		Pf6N2E2_4088	0.28	-2.1
4,766,075	+		Pf6N2E2_4088	0.28	-0.4
4,766,075	+		Pf6N2E2_4088	0.28	+0.4
4,766,075	+		Pf6N2E2_4088	0.28	-1.3
4,766,075	+		Pf6N2E2_4088	0.28	-0.4
4,766,075	+		Pf6N2E2_4088	0.28	+0.4
4,766,075	+		Pf6N2E2_4088	0.28	-0.5
4,766,075	+		Pf6N2E2_4088	0.28	-1.1
4,766,075	+		Pf6N2E2_4088	0.28	-0.2
4,766,076	-		Pf6N2E2_4088	0.28	+1.2
4,766,076	-		Pf6N2E2_4088	0.28	+1.5
4,766,076	-		Pf6N2E2_4088	0.28	+1.4
4,766,076	-		Pf6N2E2_4088	0.28	+0.1
4,766,076	-		Pf6N2E2_4088	0.28	+1.1
4,766,076	-		Pf6N2E2_4088	0.28	-0.4
4,766,076	-		Pf6N2E2_4088	0.28	-0.4
4,766,158	+		Pf6N2E2_4088	0.36	+0.0
4,766,158	+		Pf6N2E2_4088	0.36	+0.2
4,766,158	+		Pf6N2E2_4088	0.36	-0.2
4,766,159	-		Pf6N2E2_4088	0.36	+0.4
4,766,159	-		Pf6N2E2_4088	0.36	+0.1
4,766,250	+		Pf6N2E2_4088	0.45	-0.7
4,766,623	+		Pf6N2E2_4088	0.83	+0.4
4,766,624	-		Pf6N2E2_4088	0.83	-1.8
4,766,695	+				+0.1
4,766,695	+				-0.9
4,766,695	+				+1.0
4,766,696	-				-0.2
4,766,696	-				-0.3
4,766,828	-				-0.0
4,766,828	-				+1.2
4,766,833	+				+0.8
4,766,833	+				+0.2
4,766,834	-				-0.4
4,766,834	-				-0.6
4,766,834	-				+0.6
4,766,836	+				-0.8
4,766,836	+				+2.0
4,766,836	+				-0.4
4,766,836	+				+0.1
4,766,836	+				-0.2
4,766,837	-				-0.4
4,766,837	-				-1.6
4,766,837	-				-0.4
4,766,837	-				+0.2
4,766,837	-				+2.3
4,766,913	+				+0.4
4,767,120	+		Pf6N2E2_4089	0.39	+0.0
4,767,120	+		Pf6N2E2_4089	0.39	+0.1
4,767,120	+		Pf6N2E2_4089	0.39	+1.1
4,767,120	+		Pf6N2E2_4089	0.39	-0.5
4,767,120	+		Pf6N2E2_4089	0.39	-1.8
4,767,121	-		Pf6N2E2_4089	0.39	-0.5
4,767,121	-		Pf6N2E2_4089	0.39	-0.4
4,767,121	-		Pf6N2E2_4089	0.39	-0.3
4,767,201	+		Pf6N2E2_4089	0.52	+0.2
4,767,201	+		Pf6N2E2_4089	0.52	+0.3
4,767,201	+		Pf6N2E2_4089	0.52	-1.5
4,767,202	-		Pf6N2E2_4089	0.52	+0.8
4,767,202	-		Pf6N2E2_4089	0.52	-1.4
4,767,202	-		Pf6N2E2_4089	0.52	-0.5
4,767,202	-		Pf6N2E2_4089	0.52	+0.2
4,767,202	-		Pf6N2E2_4089	0.52	+2.6
4,767,270	+		Pf6N2E2_4089	0.62	+0.6
4,767,272	+		Pf6N2E2_4089	0.63	+0.3
4,767,300	+		Pf6N2E2_4089	0.67	-1.1
4,767,343	-		Pf6N2E2_4089	0.74	-0.3
4,767,498	-				+0.6
4,767,508	-				+1.0
4,767,528	+				+0.4
4,767,528	+				-1.2
4,767,528	+				+0.4
4,767,529	-				-0.7
4,767,529	-				-3.1
4,767,529	-				+0.2
4,767,529	-				-0.5
4,767,529	-				-1.3
4,767,566	+				+1.0
4,767,610	-				-0.5
4,767,747	+				-0.3
4,767,747	+				+2.8
4,767,747	+				+1.6
4,767,748	-		Pf6N2E2_4090	0.10	+0.2
4,767,748	-		Pf6N2E2_4090	0.10	+0.2
4,767,748	-		Pf6N2E2_4090	0.10	+0.5
4,767,748	-		Pf6N2E2_4090	0.10	-0.3
4,767,762	+		Pf6N2E2_4090	0.13	+0.3
4,767,762	+		Pf6N2E2_4090	0.13	+1.6
4,767,762	+		Pf6N2E2_4090	0.13	+0.4
4,767,762	+		Pf6N2E2_4090	0.13	-0.4
4,767,762	+		Pf6N2E2_4090	0.13	-0.2
4,767,762	+		Pf6N2E2_4090	0.13	+0.2
4,767,763	-		Pf6N2E2_4090	0.13	-0.4
4,767,763	-		Pf6N2E2_4090	0.13	-1.3
4,767,763	-		Pf6N2E2_4090	0.13	-0.4
4,767,763	-		Pf6N2E2_4090	0.13	-0.1