Experiment: D-Glucose (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4022 and Ga0059261_4023 overlap by 4 nucleotides Ga0059261_4023 and Ga0059261_4024 overlap by 28 nucleotides Ga0059261_4024 and Ga0059261_4025 overlap by 4 nucleotides Ga0059261_4025 and Ga0059261_4026 overlap by 8 nucleotides
Ga0059261_4022: Ga0059261_4022 - Signal transduction histidine kinase, at 4,139,490 to 4,141,757
_4022
Ga0059261_4023: Ga0059261_4023 - tRNA threonylcarbamoyl adenosine modification protein YjeE, at 4,141,754 to 4,142,200
_4023
Ga0059261_4024: Ga0059261_4024 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 4,142,173 to 4,143,165
_4024
Ga0059261_4025: Ga0059261_4025 - Nucleotidyl transferase, at 4,143,162 to 4,143,923
_4025
Ga0059261_4026: Ga0059261_4026 - double-strand break repair protein AddB, alphaproteobacterial type, at 4,143,916 to 4,146,861
_4026
Position (kb)
4142
4143
4144 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4141.179 kb on + strand, within Ga0059261_4022 at 4141.214 kb on + strand, within Ga0059261_4022 at 4141.511 kb on + strand, within Ga0059261_4022 at 4141.751 kb on + strand at 4141.751 kb on + strand at 4142.221 kb on + strand at 4142.422 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.524 kb on + strand, within Ga0059261_4024 at 4142.602 kb on + strand, within Ga0059261_4024 at 4142.602 kb on + strand, within Ga0059261_4024 at 4142.602 kb on + strand, within Ga0059261_4024 at 4142.635 kb on + strand, within Ga0059261_4024 at 4142.674 kb on + strand, within Ga0059261_4024 at 4142.743 kb on + strand, within Ga0059261_4024 at 4142.743 kb on + strand, within Ga0059261_4024 at 4142.830 kb on + strand, within Ga0059261_4024 at 4142.830 kb on + strand, within Ga0059261_4024 at 4142.947 kb on + strand, within Ga0059261_4024 at 4142.947 kb on + strand, within Ga0059261_4024 at 4143.058 kb on + strand, within Ga0059261_4024 at 4143.059 kb on - strand, within Ga0059261_4024 at 4143.120 kb on + strand at 4143.120 kb on + strand at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.378 kb on + strand, within Ga0059261_4025 at 4143.837 kb on + strand, within Ga0059261_4025 at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand at 4143.943 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) and 0.25mM L-Methionine; no added vitamins remove 4,141,179 + Ga0059261_4022 0.74 +1.7 4,141,214 + Ga0059261_4022 0.76 +1.0 4,141,511 + Ga0059261_4022 0.89 +0.1 4,141,751 + -1.1 4,141,751 + +0.2 4,142,221 + -0.6 4,142,422 + Ga0059261_4024 0.25 -1.6 4,142,524 + Ga0059261_4024 0.35 -0.6 4,142,524 + Ga0059261_4024 0.35 -0.7 4,142,524 + Ga0059261_4024 0.35 -1.0 4,142,524 + Ga0059261_4024 0.35 -1.1 4,142,524 + Ga0059261_4024 0.35 +0.9 4,142,524 + Ga0059261_4024 0.35 -1.1 4,142,524 + Ga0059261_4024 0.35 -0.1 4,142,602 + Ga0059261_4024 0.43 +0.3 4,142,602 + Ga0059261_4024 0.43 -2.0 4,142,602 + Ga0059261_4024 0.43 -1.6 4,142,635 + Ga0059261_4024 0.47 +0.3 4,142,674 + Ga0059261_4024 0.50 -1.3 4,142,743 + Ga0059261_4024 0.57 +1.1 4,142,743 + Ga0059261_4024 0.57 +0.6 4,142,830 + Ga0059261_4024 0.66 +0.2 4,142,830 + Ga0059261_4024 0.66 -4.1 4,142,947 + Ga0059261_4024 0.78 -2.2 4,142,947 + Ga0059261_4024 0.78 +0.5 4,143,058 + Ga0059261_4024 0.89 -0.1 4,143,059 - Ga0059261_4024 0.89 -0.5 4,143,120 + -0.1 4,143,120 + -0.3 4,143,378 + Ga0059261_4025 0.28 -1.1 4,143,378 + Ga0059261_4025 0.28 +0.0 4,143,378 + Ga0059261_4025 0.28 +0.9 4,143,837 + Ga0059261_4025 0.89 -0.4 4,143,943 + +0.1 4,143,943 + -0.0 4,143,943 + -0.8 4,143,943 + -0.3 4,143,943 + +0.5 4,143,943 + +0.0 4,143,943 + +0.7
Or see this region's nucleotide sequence