Experiment: D-Glucose (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3175 and Ga0059261_3176 are separated by 184 nucleotides Ga0059261_3176 and Ga0059261_3177 are separated by 63 nucleotides Ga0059261_3177 and Ga0059261_3178 are separated by 47 nucleotides Ga0059261_3178 and Ga0059261_3179 are separated by 59 nucleotides Ga0059261_3179 and Ga0059261_3180 overlap by 8 nucleotides
Ga0059261_3175: Ga0059261_3175 - DNA repair protein radc, at 3,310,044 to 3,310,736
_3175
Ga0059261_3176: Ga0059261_3176 - Uncharacterized protein conserved in bacteria, at 3,310,921 to 3,311,238
_3176
Ga0059261_3177: Ga0059261_3177 - ATP synthase F0 subcomplex A subunit, at 3,311,302 to 3,312,060
_3177
Ga0059261_3178: Ga0059261_3178 - ATP synthase subunit C, at 3,312,108 to 3,312,335
_3178
Ga0059261_3179: Ga0059261_3179 - F0F1-type ATP synthase, subunit b, at 3,312,395 to 3,312,889
_3179
Ga0059261_3180: Ga0059261_3180 - F0F1-type ATP synthase, subunit b, at 3,312,882 to 3,313,502
_3180
Position (kb)
3311
3312
3313 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3310.319 kb on + strand, within Ga0059261_3175 at 3310.320 kb on - strand, within Ga0059261_3175 at 3310.320 kb on - strand, within Ga0059261_3175 at 3310.320 kb on - strand, within Ga0059261_3175 at 3310.320 kb on - strand, within Ga0059261_3175 at 3310.320 kb on - strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.331 kb on + strand, within Ga0059261_3175 at 3310.332 kb on - strand, within Ga0059261_3175 at 3310.332 kb on - strand, within Ga0059261_3175 at 3310.332 kb on - strand, within Ga0059261_3175 at 3310.345 kb on - strand, within Ga0059261_3175 at 3310.384 kb on + strand, within Ga0059261_3175 at 3310.385 kb on - strand, within Ga0059261_3175 at 3310.385 kb on - strand, within Ga0059261_3175 at 3310.385 kb on - strand, within Ga0059261_3175 at 3310.392 kb on + strand, within Ga0059261_3175 at 3310.460 kb on + strand, within Ga0059261_3175 at 3310.460 kb on + strand, within Ga0059261_3175 at 3310.460 kb on + strand, within Ga0059261_3175 at 3310.460 kb on + strand, within Ga0059261_3175 at 3310.460 kb on + strand, within Ga0059261_3175 at 3310.461 kb on - strand, within Ga0059261_3175 at 3310.461 kb on - strand, within Ga0059261_3175 at 3310.461 kb on - strand, within Ga0059261_3175 at 3310.461 kb on - strand, within Ga0059261_3175 at 3310.461 kb on - strand, within Ga0059261_3175 at 3310.624 kb on + strand, within Ga0059261_3175 at 3310.624 kb on + strand, within Ga0059261_3175 at 3310.624 kb on + strand, within Ga0059261_3175 at 3310.624 kb on + strand, within Ga0059261_3175 at 3310.625 kb on - strand, within Ga0059261_3175 at 3310.736 kb on + strand at 3310.737 kb on - strand at 3310.737 kb on - strand at 3310.738 kb on + strand at 3310.738 kb on + strand at 3310.738 kb on + strand at 3310.738 kb on + strand at 3310.738 kb on + strand at 3310.738 kb on + strand at 3310.738 kb on + strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.739 kb on - strand at 3310.747 kb on + strand at 3310.807 kb on - strand at 3310.807 kb on - strand at 3310.807 kb on - strand at 3310.807 kb on - strand at 3310.886 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) and 0.25mM L-Methionine; no added vitamins remove 3,310,319 + Ga0059261_3175 0.40 +0.5 3,310,320 - Ga0059261_3175 0.40 +0.6 3,310,320 - Ga0059261_3175 0.40 +0.3 3,310,320 - Ga0059261_3175 0.40 +0.1 3,310,320 - Ga0059261_3175 0.40 +0.4 3,310,320 - Ga0059261_3175 0.40 +0.1 3,310,331 + Ga0059261_3175 0.41 +0.6 3,310,331 + Ga0059261_3175 0.41 +0.5 3,310,331 + Ga0059261_3175 0.41 +0.8 3,310,331 + Ga0059261_3175 0.41 +0.1 3,310,331 + Ga0059261_3175 0.41 +0.4 3,310,331 + Ga0059261_3175 0.41 +0.0 3,310,331 + Ga0059261_3175 0.41 -2.5 3,310,331 + Ga0059261_3175 0.41 +1.4 3,310,331 + Ga0059261_3175 0.41 +0.4 3,310,331 + Ga0059261_3175 0.41 -1.6 3,310,332 - Ga0059261_3175 0.42 +0.6 3,310,332 - Ga0059261_3175 0.42 +0.6 3,310,332 - Ga0059261_3175 0.42 +0.4 3,310,345 - Ga0059261_3175 0.43 +0.0 3,310,384 + Ga0059261_3175 0.49 +0.1 3,310,385 - Ga0059261_3175 0.49 -0.4 3,310,385 - Ga0059261_3175 0.49 +0.7 3,310,385 - Ga0059261_3175 0.49 -0.7 3,310,392 + Ga0059261_3175 0.50 +0.5 3,310,460 + Ga0059261_3175 0.60 +0.7 3,310,460 + Ga0059261_3175 0.60 -2.4 3,310,460 + Ga0059261_3175 0.60 -0.3 3,310,460 + Ga0059261_3175 0.60 +0.5 3,310,460 + Ga0059261_3175 0.60 +0.8 3,310,461 - Ga0059261_3175 0.60 +1.0 3,310,461 - Ga0059261_3175 0.60 -0.1 3,310,461 - Ga0059261_3175 0.60 +0.3 3,310,461 - Ga0059261_3175 0.60 -1.4 3,310,461 - Ga0059261_3175 0.60 +0.8 3,310,624 + Ga0059261_3175 0.84 -0.0 3,310,624 + Ga0059261_3175 0.84 +0.2 3,310,624 + Ga0059261_3175 0.84 +0.4 3,310,624 + Ga0059261_3175 0.84 +1.0 3,310,625 - Ga0059261_3175 0.84 -0.4 3,310,736 + -0.6 3,310,737 - +0.2 3,310,737 - -0.9 3,310,738 + +0.6 3,310,738 + +0.5 3,310,738 + +0.5 3,310,738 + +0.3 3,310,738 + -0.5 3,310,738 + +0.9 3,310,738 + +0.9 3,310,739 - +1.7 3,310,739 - +0.5 3,310,739 - -0.2 3,310,739 - +1.3 3,310,739 - +1.0 3,310,739 - +0.6 3,310,739 - +1.1 3,310,739 - -0.5 3,310,739 - -0.6 3,310,739 - +0.5 3,310,747 + +0.4 3,310,807 - +0.2 3,310,807 - +0.9 3,310,807 - -3.0 3,310,807 - +0.0 3,310,886 + +0.9
Or see this region's nucleotide sequence