Experiment: D-Glucose (C) and 0.25mM L-Methionine; no added vitamins
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0332 and Ga0059261_0333 are separated by 49 nucleotides Ga0059261_0333 and Ga0059261_0334 are separated by 228 nucleotides Ga0059261_0334 and Ga0059261_0335 are separated by 308 nucleotides
Ga0059261_0332: Ga0059261_0332 - Esterase/lipase, at 316,810 to 317,802
_0332
Ga0059261_0333: Ga0059261_0333 - DNA repair photolyase, at 317,852 to 318,922
_0333
Ga0059261_0334: Ga0059261_0334 - hypothetical protein, at 319,151 to 319,504
_0334
Ga0059261_0335: Ga0059261_0335 - Bacterial regulatory proteins, luxR family, at 319,813 to 320,256
_0335
Position (kb) 317
318
319 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 316.908 kb on - strand at 316.908 kb on - strand at 317.056 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.062 kb on + strand, within Ga0059261_0332 at 317.063 kb on - strand, within Ga0059261_0332 at 317.063 kb on - strand, within Ga0059261_0332 at 317.063 kb on - strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.128 kb on + strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.129 kb on - strand, within Ga0059261_0332 at 317.212 kb on + strand, within Ga0059261_0332 at 317.212 kb on + strand, within Ga0059261_0332 at 317.213 kb on - strand, within Ga0059261_0332 at 317.401 kb on + strand, within Ga0059261_0332 at 317.401 kb on + strand, within Ga0059261_0332 at 317.402 kb on - strand, within Ga0059261_0332 at 317.461 kb on + strand at 317.461 kb on + strand, within Ga0059261_0332 at 317.462 kb on - strand, within Ga0059261_0332 at 317.462 kb on - strand, within Ga0059261_0332 at 317.632 kb on + strand, within Ga0059261_0332 at 317.679 kb on - strand, within Ga0059261_0332 at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.800 kb on + strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.801 kb on - strand at 317.841 kb on - strand at 317.888 kb on - strand at 318.071 kb on + strand, within Ga0059261_0333 at 318.098 kb on + strand, within Ga0059261_0333 at 318.098 kb on + strand, within Ga0059261_0333 at 318.098 kb on + strand, within Ga0059261_0333 at 318.098 kb on + strand, within Ga0059261_0333 at 318.099 kb on - strand, within Ga0059261_0333 at 318.099 kb on - strand, within Ga0059261_0333 at 318.125 kb on + strand, within Ga0059261_0333 at 318.126 kb on - strand, within Ga0059261_0333 at 318.221 kb on + strand, within Ga0059261_0333 at 318.221 kb on + strand, within Ga0059261_0333 at 318.221 kb on + strand, within Ga0059261_0333 at 318.222 kb on - strand, within Ga0059261_0333 at 318.222 kb on - strand, within Ga0059261_0333 at 318.304 kb on + strand, within Ga0059261_0333 at 318.304 kb on + strand, within Ga0059261_0333 at 318.312 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.536 kb on + strand, within Ga0059261_0333 at 318.537 kb on - strand, within Ga0059261_0333 at 318.537 kb on - strand, within Ga0059261_0333 at 318.537 kb on - strand, within Ga0059261_0333 at 318.537 kb on - strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.589 kb on + strand, within Ga0059261_0333 at 318.590 kb on - strand, within Ga0059261_0333 at 318.590 kb on - strand, within Ga0059261_0333 at 318.590 kb on - strand, within Ga0059261_0333 at 318.590 kb on - strand, within Ga0059261_0333 at 318.632 kb on + strand, within Ga0059261_0333 at 318.632 kb on + strand, within Ga0059261_0333 at 318.632 kb on + strand, within Ga0059261_0333 at 318.632 kb on + strand, within Ga0059261_0333 at 318.633 kb on - strand, within Ga0059261_0333 at 318.633 kb on - strand, within Ga0059261_0333 at 318.860 kb on + strand at 318.860 kb on + strand at 318.861 kb on - strand at 318.861 kb on - strand at 318.861 kb on - strand at 318.861 kb on - strand at 318.861 kb on - strand at 318.861 kb on - strand at 318.861 kb on - strand at 318.861 kb on - strand at 318.861 kb on - strand at 318.862 kb on + strand at 318.862 kb on + strand at 318.863 kb on - strand at 318.920 kb on + strand at 318.920 kb on + strand at 318.920 kb on + strand at 318.921 kb on - strand at 318.921 kb on - strand at 318.921 kb on - strand at 318.921 kb on - strand at 318.921 kb on - strand at 318.925 kb on + strand at 318.925 kb on + strand at 318.925 kb on + strand at 318.926 kb on - strand at 318.926 kb on - strand at 318.926 kb on - strand at 318.927 kb on + strand at 318.927 kb on + strand at 318.927 kb on + strand at 318.927 kb on + strand at 318.927 kb on + strand at 318.927 kb on + strand at 318.928 kb on - strand at 318.928 kb on - strand at 318.928 kb on - strand at 318.928 kb on - strand at 318.978 kb on - strand at 318.978 kb on - strand at 319.106 kb on - strand at 319.145 kb on + strand at 319.145 kb on + strand at 319.145 kb on + strand at 319.145 kb on + strand at 319.145 kb on + strand at 319.145 kb on + strand at 319.145 kb on + strand at 319.146 kb on - strand at 319.146 kb on - strand at 319.146 kb on - strand at 319.146 kb on - strand at 319.146 kb on - strand at 319.146 kb on - strand at 319.146 kb on - strand at 319.149 kb on + strand at 319.149 kb on + strand at 319.149 kb on + strand at 319.149 kb on + strand at 319.149 kb on + strand at 319.149 kb on + strand at 319.149 kb on + strand at 319.149 kb on + strand at 319.149 kb on + strand at 319.150 kb on - strand at 319.150 kb on - strand at 319.150 kb on - strand at 319.150 kb on - strand at 319.150 kb on - strand at 319.150 kb on - strand at 319.150 kb on - strand at 319.164 kb on + strand at 319.164 kb on + strand at 319.200 kb on + strand, within Ga0059261_0334 at 319.227 kb on + strand, within Ga0059261_0334 at 319.246 kb on - strand, within Ga0059261_0334 at 319.259 kb on + strand, within Ga0059261_0334 at 319.260 kb on - strand, within Ga0059261_0334 at 319.260 kb on - strand, within Ga0059261_0334 at 319.298 kb on + strand at 319.298 kb on + strand, within Ga0059261_0334 at 319.298 kb on + strand, within Ga0059261_0334 at 319.298 kb on + strand at 319.298 kb on + strand, within Ga0059261_0334 at 319.299 kb on - strand, within Ga0059261_0334 at 319.299 kb on - strand, within Ga0059261_0334 at 319.299 kb on - strand, within Ga0059261_0334 at 319.299 kb on - strand, within Ga0059261_0334 at 319.299 kb on - strand, within Ga0059261_0334 at 319.302 kb on + strand, within Ga0059261_0334 at 319.303 kb on - strand, within Ga0059261_0334 at 319.320 kb on + strand, within Ga0059261_0334 at 319.321 kb on - strand, within Ga0059261_0334 at 319.323 kb on + strand, within Ga0059261_0334 at 319.323 kb on + strand, within Ga0059261_0334 at 319.323 kb on + strand, within Ga0059261_0334 at 319.323 kb on + strand, within Ga0059261_0334 at 319.324 kb on - strand, within Ga0059261_0334 at 319.324 kb on - strand, within Ga0059261_0334 at 319.366 kb on - strand, within Ga0059261_0334 at 319.466 kb on + strand, within Ga0059261_0334 at 319.466 kb on + strand, within Ga0059261_0334 at 319.467 kb on - strand, within Ga0059261_0334 at 319.467 kb on - strand, within Ga0059261_0334 at 319.467 kb on - strand, within Ga0059261_0334 at 319.467 kb on - strand, within Ga0059261_0334 at 319.467 kb on - strand, within Ga0059261_0334 at 319.467 kb on - strand, within Ga0059261_0334 at 319.476 kb on - strand at 319.476 kb on - strand at 319.480 kb on + strand at 319.480 kb on + strand at 319.480 kb on + strand at 319.503 kb on - strand at 319.864 kb on + strand, within Ga0059261_0335 at 319.864 kb on + strand, within Ga0059261_0335 at 319.865 kb on - strand, within Ga0059261_0335 at 319.865 kb on - strand, within Ga0059261_0335 at 319.865 kb on - strand, within Ga0059261_0335 at 319.912 kb on + strand, within Ga0059261_0335 at 319.913 kb on - strand, within Ga0059261_0335 at 319.913 kb on - strand, within Ga0059261_0335
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) and 0.25mM L-Methionine; no added vitamins remove 316,908 - +1.8 316,908 - +0.5 317,056 + Ga0059261_0332 0.25 +0.3 317,062 + Ga0059261_0332 0.25 -0.4 317,062 + Ga0059261_0332 0.25 +1.3 317,062 + Ga0059261_0332 0.25 +1.7 317,062 + Ga0059261_0332 0.25 +0.2 317,062 + Ga0059261_0332 0.25 +1.0 317,062 + Ga0059261_0332 0.25 +0.9 317,062 + Ga0059261_0332 0.25 +0.9 317,062 + Ga0059261_0332 0.25 -0.1 317,062 + Ga0059261_0332 0.25 +0.5 317,062 + Ga0059261_0332 0.25 -0.0 317,063 - Ga0059261_0332 0.25 +0.2 317,063 - Ga0059261_0332 0.25 +1.0 317,063 - Ga0059261_0332 0.25 +1.1 317,128 + Ga0059261_0332 0.32 +1.0 317,128 + Ga0059261_0332 0.32 +0.4 317,128 + Ga0059261_0332 0.32 +0.6 317,128 + Ga0059261_0332 0.32 +1.7 317,128 + Ga0059261_0332 0.32 +0.1 317,128 + Ga0059261_0332 0.32 -0.0 317,128 + Ga0059261_0332 0.32 -0.4 317,128 + Ga0059261_0332 0.32 +0.4 317,128 + Ga0059261_0332 0.32 +0.8 317,128 + Ga0059261_0332 0.32 +0.2 317,129 - Ga0059261_0332 0.32 +0.4 317,129 - Ga0059261_0332 0.32 +0.0 317,129 - Ga0059261_0332 0.32 +0.1 317,129 - Ga0059261_0332 0.32 +0.4 317,129 - Ga0059261_0332 0.32 -1.0 317,129 - Ga0059261_0332 0.32 +0.7 317,129 - Ga0059261_0332 0.32 +1.0 317,129 - Ga0059261_0332 0.32 -0.6 317,129 - Ga0059261_0332 0.32 -0.0 317,129 - Ga0059261_0332 0.32 +1.4 317,212 + Ga0059261_0332 0.40 +1.2 317,212 + Ga0059261_0332 0.40 -0.1 317,213 - Ga0059261_0332 0.41 -1.1 317,401 + Ga0059261_0332 0.60 -2.5 317,401 + Ga0059261_0332 0.60 -0.1 317,402 - Ga0059261_0332 0.60 -0.5 317,461 + -2.1 317,461 + Ga0059261_0332 0.66 -0.2 317,462 - Ga0059261_0332 0.66 +0.9 317,462 - Ga0059261_0332 0.66 +0.1 317,632 + Ga0059261_0332 0.83 +1.0 317,679 - Ga0059261_0332 0.88 +0.9 317,800 + +1.1 317,800 + +0.9 317,800 + -0.4 317,800 + -0.9 317,800 + +0.1 317,800 + +1.3 317,800 + -0.4 317,801 - +0.7 317,801 - +1.0 317,801 - +0.4 317,801 - +1.2 317,801 - -1.9 317,801 - -0.5 317,801 - -2.4 317,841 - +0.2 317,888 - +0.4 318,071 + Ga0059261_0333 0.20 -0.6 318,098 + Ga0059261_0333 0.23 +0.5 318,098 + Ga0059261_0333 0.23 +0.9 318,098 + Ga0059261_0333 0.23 +0.3 318,098 + Ga0059261_0333 0.23 +1.0 318,099 - Ga0059261_0333 0.23 +0.2 318,099 - Ga0059261_0333 0.23 -0.1 318,125 + Ga0059261_0333 0.25 -2.1 318,126 - Ga0059261_0333 0.26 +0.2 318,221 + Ga0059261_0333 0.34 -0.5 318,221 + Ga0059261_0333 0.34 -1.6 318,221 + Ga0059261_0333 0.34 -0.5 318,222 - Ga0059261_0333 0.35 +0.2 318,222 - Ga0059261_0333 0.35 +0.2 318,304 + Ga0059261_0333 0.42 -1.9 318,304 + Ga0059261_0333 0.42 +0.7 318,312 + Ga0059261_0333 0.43 -2.6 318,536 + Ga0059261_0333 0.64 +0.9 318,536 + Ga0059261_0333 0.64 +0.1 318,536 + Ga0059261_0333 0.64 +0.9 318,536 + Ga0059261_0333 0.64 +0.4 318,536 + Ga0059261_0333 0.64 -0.1 318,537 - Ga0059261_0333 0.64 -0.7 318,537 - Ga0059261_0333 0.64 +0.1 318,537 - Ga0059261_0333 0.64 +0.2 318,537 - Ga0059261_0333 0.64 +0.5 318,589 + Ga0059261_0333 0.69 +0.6 318,589 + Ga0059261_0333 0.69 +0.9 318,589 + Ga0059261_0333 0.69 -0.1 318,589 + Ga0059261_0333 0.69 -0.1 318,589 + Ga0059261_0333 0.69 +0.5 318,589 + Ga0059261_0333 0.69 -0.0 318,589 + Ga0059261_0333 0.69 -0.8 318,590 - Ga0059261_0333 0.69 +0.1 318,590 - Ga0059261_0333 0.69 +0.5 318,590 - Ga0059261_0333 0.69 +0.1 318,590 - Ga0059261_0333 0.69 +0.6 318,632 + Ga0059261_0333 0.73 +0.8 318,632 + Ga0059261_0333 0.73 +0.3 318,632 + Ga0059261_0333 0.73 +0.1 318,632 + Ga0059261_0333 0.73 +0.4 318,633 - Ga0059261_0333 0.73 -1.7 318,633 - Ga0059261_0333 0.73 -1.1 318,860 + +0.1 318,860 + +1.1 318,861 - -0.8 318,861 - -3.8 318,861 - +1.3 318,861 - -2.2 318,861 - +0.6 318,861 - +1.5 318,861 - -0.2 318,861 - -0.3 318,861 - -0.0 318,862 + -0.0 318,862 + +0.9 318,863 - +0.3 318,920 + +1.0 318,920 + -0.1 318,920 + +0.0 318,921 - -0.4 318,921 - -1.9 318,921 - +0.1 318,921 - -0.9 318,921 - +1.3 318,925 + +0.8 318,925 + -0.5 318,925 + +1.1 318,926 - +0.1 318,926 - +0.3 318,926 - -0.7 318,927 + +0.1 318,927 + +0.3 318,927 + +0.1 318,927 + -0.3 318,927 + +0.6 318,927 + -0.3 318,928 - +0.4 318,928 - -0.4 318,928 - +0.3 318,928 - -0.6 318,978 - +1.0 318,978 - -0.8 319,106 - -0.0 319,145 + +0.7 319,145 + -0.3 319,145 + -2.2 319,145 + +0.0 319,145 + -0.0 319,145 + +0.2 319,145 + +0.3 319,146 - -2.7 319,146 - +0.1 319,146 - -0.3 319,146 - -0.3 319,146 - -1.2 319,146 - -0.4 319,146 - -1.3 319,149 + -0.8 319,149 + -1.6 319,149 + +1.1 319,149 + +1.0 319,149 + +1.3 319,149 + -0.9 319,149 + -0.2 319,149 + -1.3 319,149 + -0.3 319,150 - +0.9 319,150 - +1.2 319,150 - +0.2 319,150 - +1.6 319,150 - -1.1 319,150 - +0.5 319,150 - +0.5 319,164 + +0.1 319,164 + +0.1 319,200 + Ga0059261_0334 0.14 -0.5 319,227 + Ga0059261_0334 0.21 +0.4 319,246 - Ga0059261_0334 0.27 +0.4 319,259 + Ga0059261_0334 0.31 +0.2 319,260 - Ga0059261_0334 0.31 +1.4 319,260 - Ga0059261_0334 0.31 +0.4 319,298 + -0.8 319,298 + Ga0059261_0334 0.42 +0.4 319,298 + Ga0059261_0334 0.42 +0.3 319,298 + -0.2 319,298 + Ga0059261_0334 0.42 -0.5 319,299 - Ga0059261_0334 0.42 +0.2 319,299 - Ga0059261_0334 0.42 +1.1 319,299 - Ga0059261_0334 0.42 +0.3 319,299 - Ga0059261_0334 0.42 +0.0 319,299 - Ga0059261_0334 0.42 +1.4 319,302 + Ga0059261_0334 0.43 +0.6 319,303 - Ga0059261_0334 0.43 -0.5 319,320 + Ga0059261_0334 0.48 +0.2 319,321 - Ga0059261_0334 0.48 +0.2 319,323 + Ga0059261_0334 0.49 +0.5 319,323 + Ga0059261_0334 0.49 +0.7 319,323 + Ga0059261_0334 0.49 +0.1 319,323 + Ga0059261_0334 0.49 +0.2 319,324 - Ga0059261_0334 0.49 -0.1 319,324 - Ga0059261_0334 0.49 +1.3 319,366 - Ga0059261_0334 0.61 +0.8 319,466 + Ga0059261_0334 0.89 -0.8 319,466 + Ga0059261_0334 0.89 +0.0 319,467 - Ga0059261_0334 0.89 +0.3 319,467 - Ga0059261_0334 0.89 -0.2 319,467 - Ga0059261_0334 0.89 +0.5 319,467 - Ga0059261_0334 0.89 +0.9 319,467 - Ga0059261_0334 0.89 +0.5 319,467 - Ga0059261_0334 0.89 +1.1 319,476 - -0.1 319,476 - -1.0 319,480 + +0.5 319,480 + -0.2 319,480 + -0.8 319,503 - -1.7 319,864 + Ga0059261_0335 0.11 +0.2 319,864 + Ga0059261_0335 0.11 +1.0 319,865 - Ga0059261_0335 0.12 +1.3 319,865 - Ga0059261_0335 0.12 -1.9 319,865 - Ga0059261_0335 0.12 +0.2 319,912 + Ga0059261_0335 0.22 -0.6 319,913 - Ga0059261_0335 0.23 +0.1 319,913 - Ga0059261_0335 0.23 -0.9
Or see this region's nucleotide sequence