Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_0123

Experiment: D-Glucose (C) and 0.25mM L-Methionine; no added vitamins

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_0122 and Ga0059261_0123 overlap by 4 nucleotidesGa0059261_0123 and Ga0059261_0124 overlap by 4 nucleotides Ga0059261_0122: Ga0059261_0122 - D-alanyl-D-alanine carboxypeptidase, at 116,069 to 117,256 _0122 Ga0059261_0123: Ga0059261_0123 - dTMP kinase, at 117,253 to 117,876 _0123 Ga0059261_0124: Ga0059261_0124 - DNA polymerase III, delta subunit, at 117,873 to 118,856 _0124 Position (kb) 117 118Strain fitness (log2 ratio) -1 0 1at 116.603 kb on + strand, within Ga0059261_0122at 118.854 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C) and 0.25mM L-Methionine; no added vitamins
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116,603 + Ga0059261_0122 0.45 +0.3
118,854 + +0.4

Or see this region's nucleotide sequence