Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23000 and BWI76_RS23005 are separated by 74 nucleotides BWI76_RS23005 and BWI76_RS23010 overlap by 7 nucleotides BWI76_RS23010 and BWI76_RS23015 overlap by 4 nucleotides BWI76_RS23015 and BWI76_RS23020 are separated by 8 nucleotides
BWI76_RS23000: BWI76_RS23000 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 4,798,846 to 4,799,901
_RS23000
BWI76_RS23005: BWI76_RS23005 - bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase, at 4,799,976 to 4,800,521
_RS23005
BWI76_RS23010: BWI76_RS23010 - cobyric acid synthase CobQ, at 4,800,515 to 4,802,038
_RS23010
BWI76_RS23015: BWI76_RS23015 - cobalt transporter ATP-binding subunit, at 4,802,035 to 4,802,850
_RS23015
BWI76_RS23020: BWI76_RS23020 - cobalamin biosynthesis protein CbiQ, at 4,802,859 to 4,803,536
_RS23020
Position (kb) 4800
4801
4802
4803 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 4799.933 kb on - strand at 4800.011 kb on + strand at 4800.013 kb on - strand at 4800.126 kb on - strand, within BWI76_RS23005 at 4800.368 kb on - strand, within BWI76_RS23005 at 4800.650 kb on + strand at 4800.697 kb on + strand, within BWI76_RS23010 at 4800.891 kb on + strand, within BWI76_RS23010 at 4800.920 kb on - strand, within BWI76_RS23010 at 4800.938 kb on - strand, within BWI76_RS23010 at 4801.437 kb on - strand, within BWI76_RS23010 at 4801.464 kb on + strand, within BWI76_RS23010 at 4801.464 kb on + strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010 at 4801.624 kb on + strand, within BWI76_RS23010 at 4801.687 kb on - strand, within BWI76_RS23010 at 4801.687 kb on - strand, within BWI76_RS23010 at 4801.687 kb on - strand, within BWI76_RS23010 at 4801.714 kb on + strand, within BWI76_RS23010 at 4801.839 kb on - strand, within BWI76_RS23010 at 4801.871 kb on + strand, within BWI76_RS23010 at 4802.113 kb on - strand at 4802.288 kb on + strand, within BWI76_RS23015 at 4802.858 kb on - strand at 4802.875 kb on + strand at 4802.875 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 4,799,933 - +0.9 4,800,011 + -0.6 4,800,013 - -1.1 4,800,126 - BWI76_RS23005 0.27 -0.3 4,800,368 - BWI76_RS23005 0.72 +0.6 4,800,650 + -0.6 4,800,697 + BWI76_RS23010 0.12 +3.2 4,800,891 + BWI76_RS23010 0.25 +4.0 4,800,920 - BWI76_RS23010 0.27 +0.9 4,800,938 - BWI76_RS23010 0.28 -0.6 4,801,437 - BWI76_RS23010 0.60 +0.2 4,801,464 + BWI76_RS23010 0.62 -0.1 4,801,464 + BWI76_RS23010 0.62 +0.4 4,801,472 - BWI76_RS23010 0.63 +0.0 4,801,472 - BWI76_RS23010 0.63 +0.3 4,801,472 - BWI76_RS23010 0.63 +1.8 4,801,624 + BWI76_RS23010 0.73 +1.2 4,801,687 - BWI76_RS23010 0.77 -0.4 4,801,687 - BWI76_RS23010 0.77 -0.1 4,801,687 - BWI76_RS23010 0.77 +0.5 4,801,714 + BWI76_RS23010 0.79 +0.5 4,801,839 - BWI76_RS23010 0.87 -0.2 4,801,871 + BWI76_RS23010 0.89 -1.5 4,802,113 - +0.2 4,802,288 + BWI76_RS23015 0.31 +0.5 4,802,858 - -0.2 4,802,875 + -0.3 4,802,875 + -0.2
Or see this region's nucleotide sequence