Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20205 and BWI76_RS20210 are separated by 87 nucleotides BWI76_RS20210 and BWI76_RS20215 are separated by 53 nucleotides BWI76_RS20215 and BWI76_RS20220 are separated by 76 nucleotides BWI76_RS20220 and BWI76_RS20225 are separated by 11 nucleotides
BWI76_RS20205: BWI76_RS20205 - aminotransferase AlaT, at 4,234,466 to 4,235,683
_RS20205
BWI76_RS20210: BWI76_RS20210 - 5'-deoxynucleotidase, at 4,235,771 to 4,236,370
_RS20210
BWI76_RS20215: BWI76_RS20215 - transcriptional regulator, at 4,236,424 to 4,238,256
_RS20215
BWI76_RS20220: BWI76_RS20220 - sugar phosphatase, at 4,238,333 to 4,238,992
_RS20220
BWI76_RS20225: BWI76_RS20225 - hypothetical protein, at 4,239,004 to 4,239,498
_RS20225
Position (kb)
4236
4237
4238
4239 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4235.442 kb on - strand, within BWI76_RS20205 at 4235.459 kb on + strand, within BWI76_RS20205 at 4235.459 kb on + strand, within BWI76_RS20205 at 4235.757 kb on + strand at 4235.757 kb on + strand at 4235.872 kb on - strand, within BWI76_RS20210 at 4235.935 kb on + strand, within BWI76_RS20210 at 4235.943 kb on - strand, within BWI76_RS20210 at 4235.943 kb on - strand, within BWI76_RS20210 at 4235.943 kb on - strand, within BWI76_RS20210 at 4236.053 kb on - strand, within BWI76_RS20210 at 4236.285 kb on + strand, within BWI76_RS20210 at 4236.290 kb on + strand, within BWI76_RS20210 at 4236.390 kb on + strand at 4236.458 kb on + strand at 4236.619 kb on - strand, within BWI76_RS20215 at 4236.684 kb on - strand, within BWI76_RS20215 at 4236.859 kb on + strand, within BWI76_RS20215 at 4237.010 kb on - strand, within BWI76_RS20215 at 4237.167 kb on - strand, within BWI76_RS20215 at 4237.265 kb on + strand, within BWI76_RS20215 at 4237.357 kb on - strand, within BWI76_RS20215 at 4237.658 kb on + strand, within BWI76_RS20215 at 4237.666 kb on - strand, within BWI76_RS20215 at 4237.921 kb on + strand, within BWI76_RS20215 at 4237.930 kb on + strand, within BWI76_RS20215 at 4237.967 kb on - strand, within BWI76_RS20215 at 4238.082 kb on + strand at 4238.124 kb on + strand at 4238.156 kb on + strand at 4238.231 kb on - strand at 4238.251 kb on + strand at 4238.558 kb on - strand, within BWI76_RS20220 at 4238.720 kb on - strand, within BWI76_RS20220 at 4238.738 kb on - strand, within BWI76_RS20220 at 4238.979 kb on + strand at 4238.979 kb on + strand at 4238.979 kb on + strand at 4238.979 kb on + strand at 4238.987 kb on - strand at 4239.045 kb on - strand at 4239.045 kb on - strand at 4239.226 kb on + strand, within BWI76_RS20225
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 4,235,442 - BWI76_RS20205 0.80 -0.7 4,235,459 + BWI76_RS20205 0.82 -0.7 4,235,459 + BWI76_RS20205 0.82 -1.2 4,235,757 + +1.3 4,235,757 + +0.1 4,235,872 - BWI76_RS20210 0.17 +0.8 4,235,935 + BWI76_RS20210 0.27 -0.6 4,235,943 - BWI76_RS20210 0.29 -0.2 4,235,943 - BWI76_RS20210 0.29 -0.4 4,235,943 - BWI76_RS20210 0.29 -1.6 4,236,053 - BWI76_RS20210 0.47 -1.7 4,236,285 + BWI76_RS20210 0.86 -0.5 4,236,290 + BWI76_RS20210 0.86 -0.5 4,236,390 + -0.3 4,236,458 + +1.4 4,236,619 - BWI76_RS20215 0.11 +0.4 4,236,684 - BWI76_RS20215 0.14 +1.4 4,236,859 + BWI76_RS20215 0.24 +0.4 4,237,010 - BWI76_RS20215 0.32 +0.4 4,237,167 - BWI76_RS20215 0.41 -0.0 4,237,265 + BWI76_RS20215 0.46 +1.4 4,237,357 - BWI76_RS20215 0.51 -0.9 4,237,658 + BWI76_RS20215 0.67 -0.9 4,237,666 - BWI76_RS20215 0.68 -0.8 4,237,921 + BWI76_RS20215 0.82 +0.4 4,237,930 + BWI76_RS20215 0.82 +0.1 4,237,967 - BWI76_RS20215 0.84 +0.5 4,238,082 + +0.4 4,238,124 + -0.0 4,238,156 + -0.7 4,238,231 - -0.0 4,238,251 + -2.0 4,238,558 - BWI76_RS20220 0.34 +0.1 4,238,720 - BWI76_RS20220 0.59 -0.1 4,238,738 - BWI76_RS20220 0.61 -0.0 4,238,979 + -0.7 4,238,979 + -0.5 4,238,979 + +0.2 4,238,979 + +2.1 4,238,987 - -0.4 4,239,045 - +0.4 4,239,045 - +0.1 4,239,226 + BWI76_RS20225 0.45 +0.4
Or see this region's nucleotide sequence