Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10350 and BWI76_RS10355 are separated by 213 nucleotides BWI76_RS10355 and BWI76_RS10360 overlap by 25 nucleotides BWI76_RS10360 and BWI76_RS10365 are separated by 433 nucleotides
BWI76_RS10350: BWI76_RS10350 - EamA family transporter, at 2,191,884 to 2,192,783
_RS10350
BWI76_RS10355: BWI76_RS10355 - spermidine/putrescine ABC transporter, at 2,192,997 to 2,194,092
_RS10355
BWI76_RS10360: BWI76_RS10360 - TetR family transcriptional regulator, at 2,194,068 to 2,194,646
_RS10360
BWI76_RS10365: BWI76_RS10365 - class IV aminotransferase, at 2,195,080 to 2,196,045
_RS10365
Position (kb)
2192
2193
2194
2195 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2192.049 kb on + strand, within BWI76_RS10350 at 2192.066 kb on + strand, within BWI76_RS10350 at 2192.115 kb on + strand, within BWI76_RS10350 at 2192.118 kb on - strand, within BWI76_RS10350 at 2192.123 kb on - strand, within BWI76_RS10350 at 2192.161 kb on + strand, within BWI76_RS10350 at 2192.204 kb on + strand, within BWI76_RS10350 at 2192.204 kb on + strand, within BWI76_RS10350 at 2192.212 kb on - strand, within BWI76_RS10350 at 2192.212 kb on - strand, within BWI76_RS10350 at 2192.273 kb on + strand, within BWI76_RS10350 at 2192.298 kb on + strand, within BWI76_RS10350 at 2192.298 kb on + strand, within BWI76_RS10350 at 2192.306 kb on - strand, within BWI76_RS10350 at 2192.306 kb on - strand, within BWI76_RS10350 at 2192.306 kb on - strand, within BWI76_RS10350 at 2192.319 kb on + strand, within BWI76_RS10350 at 2192.327 kb on - strand, within BWI76_RS10350 at 2192.359 kb on - strand, within BWI76_RS10350 at 2192.359 kb on - strand, within BWI76_RS10350 at 2192.361 kb on + strand, within BWI76_RS10350 at 2192.369 kb on - strand, within BWI76_RS10350 at 2192.422 kb on - strand, within BWI76_RS10350 at 2192.424 kb on + strand, within BWI76_RS10350 at 2192.481 kb on + strand, within BWI76_RS10350 at 2192.486 kb on - strand, within BWI76_RS10350 at 2192.493 kb on + strand, within BWI76_RS10350 at 2192.581 kb on - strand, within BWI76_RS10350 at 2192.581 kb on - strand, within BWI76_RS10350 at 2192.581 kb on - strand, within BWI76_RS10350 at 2192.808 kb on - strand at 2192.943 kb on + strand at 2192.965 kb on + strand at 2193.055 kb on - strand at 2193.139 kb on - strand, within BWI76_RS10355 at 2193.141 kb on + strand, within BWI76_RS10355 at 2193.149 kb on - strand, within BWI76_RS10355 at 2193.224 kb on + strand, within BWI76_RS10355 at 2193.241 kb on - strand at 2193.241 kb on - strand, within BWI76_RS10355 at 2193.399 kb on + strand, within BWI76_RS10355 at 2193.426 kb on + strand, within BWI76_RS10355 at 2193.548 kb on + strand, within BWI76_RS10355 at 2193.632 kb on + strand, within BWI76_RS10355 at 2193.632 kb on + strand, within BWI76_RS10355 at 2193.818 kb on + strand, within BWI76_RS10355 at 2193.855 kb on - strand, within BWI76_RS10355 at 2193.855 kb on - strand, within BWI76_RS10355 at 2193.978 kb on + strand, within BWI76_RS10355 at 2194.443 kb on + strand, within BWI76_RS10360 at 2194.673 kb on - strand at 2194.742 kb on + strand at 2194.883 kb on + strand at 2194.967 kb on + strand at 2195.026 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 2,192,049 + BWI76_RS10350 0.18 +0.5 2,192,066 + BWI76_RS10350 0.20 +0.1 2,192,115 + BWI76_RS10350 0.26 -0.3 2,192,118 - BWI76_RS10350 0.26 -1.0 2,192,123 - BWI76_RS10350 0.27 +1.1 2,192,161 + BWI76_RS10350 0.31 -0.7 2,192,204 + BWI76_RS10350 0.36 +0.4 2,192,204 + BWI76_RS10350 0.36 +0.1 2,192,212 - BWI76_RS10350 0.36 +0.0 2,192,212 - BWI76_RS10350 0.36 -1.1 2,192,273 + BWI76_RS10350 0.43 +1.1 2,192,298 + BWI76_RS10350 0.46 +0.8 2,192,298 + BWI76_RS10350 0.46 +0.9 2,192,306 - BWI76_RS10350 0.47 -0.9 2,192,306 - BWI76_RS10350 0.47 -0.9 2,192,306 - BWI76_RS10350 0.47 +0.5 2,192,319 + BWI76_RS10350 0.48 +0.4 2,192,327 - BWI76_RS10350 0.49 -0.9 2,192,359 - BWI76_RS10350 0.53 +1.5 2,192,359 - BWI76_RS10350 0.53 +0.1 2,192,361 + BWI76_RS10350 0.53 +0.2 2,192,369 - BWI76_RS10350 0.54 -3.0 2,192,422 - BWI76_RS10350 0.60 -0.2 2,192,424 + BWI76_RS10350 0.60 +0.6 2,192,481 + BWI76_RS10350 0.66 -0.9 2,192,486 - BWI76_RS10350 0.67 -0.7 2,192,493 + BWI76_RS10350 0.68 -0.2 2,192,581 - BWI76_RS10350 0.77 -0.4 2,192,581 - BWI76_RS10350 0.77 -0.1 2,192,581 - BWI76_RS10350 0.77 +0.4 2,192,808 - +0.3 2,192,943 + -0.7 2,192,965 + -0.4 2,193,055 - -0.5 2,193,139 - BWI76_RS10355 0.13 +0.4 2,193,141 + BWI76_RS10355 0.13 +0.0 2,193,149 - BWI76_RS10355 0.14 +1.6 2,193,224 + BWI76_RS10355 0.21 +1.4 2,193,241 - -0.5 2,193,241 - BWI76_RS10355 0.22 +0.8 2,193,399 + BWI76_RS10355 0.37 +0.2 2,193,426 + BWI76_RS10355 0.39 -0.6 2,193,548 + BWI76_RS10355 0.50 +1.1 2,193,632 + BWI76_RS10355 0.58 -0.6 2,193,632 + BWI76_RS10355 0.58 +2.2 2,193,818 + BWI76_RS10355 0.75 -0.9 2,193,855 - BWI76_RS10355 0.78 +0.3 2,193,855 - BWI76_RS10355 0.78 +0.5 2,193,978 + BWI76_RS10355 0.90 -2.3 2,194,443 + BWI76_RS10360 0.65 +1.1 2,194,673 - +0.1 2,194,742 + -0.3 2,194,883 + -1.0 2,194,967 + -1.1 2,195,026 + +0.1
Or see this region's nucleotide sequence