Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS21700 and BPHYT_RS21705 are separated by 148 nucleotides BPHYT_RS21705 and BPHYT_RS21710 are separated by 187 nucleotides
BPHYT_RS21700: BPHYT_RS21700 - phosphotransacetylase, at 423,371 to 424,405
_RS21700
BPHYT_RS21705: BPHYT_RS21705 - sulfoacetaldehyde acetyltransferase, at 424,554 to 426,386
_RS21705
BPHYT_RS21710: BPHYT_RS21710 - DeoR faimly transcriptional regulator, at 426,574 to 428,007
_RS21710
Position (kb) 424
425
426
427 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 424.189 kb on + strand, within BPHYT_RS21700 at 424.190 kb on - strand, within BPHYT_RS21700 at 424.406 kb on - strand at 424.561 kb on + strand at 424.562 kb on - strand at 424.570 kb on + strand at 424.813 kb on + strand, within BPHYT_RS21705 at 424.945 kb on + strand, within BPHYT_RS21705 at 424.946 kb on - strand, within BPHYT_RS21705 at 425.065 kb on + strand, within BPHYT_RS21705 at 425.167 kb on + strand, within BPHYT_RS21705 at 425.633 kb on - strand, within BPHYT_RS21705 at 425.633 kb on - strand, within BPHYT_RS21705 at 425.837 kb on - strand, within BPHYT_RS21705 at 425.950 kb on + strand, within BPHYT_RS21705 at 425.951 kb on - strand, within BPHYT_RS21705 at 426.065 kb on - strand, within BPHYT_RS21705 at 426.594 kb on - strand at 427.076 kb on - strand, within BPHYT_RS21710 at 427.298 kb on + strand, within BPHYT_RS21710 at 427.330 kb on - strand, within BPHYT_RS21710
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 424,189 + BPHYT_RS21700 0.79 -0.5 424,190 - BPHYT_RS21700 0.79 -0.5 424,406 - +0.1 424,561 + -1.4 424,562 - -0.4 424,570 + -2.7 424,813 + BPHYT_RS21705 0.14 -0.9 424,945 + BPHYT_RS21705 0.21 -1.5 424,946 - BPHYT_RS21705 0.21 -2.4 425,065 + BPHYT_RS21705 0.28 -0.6 425,167 + BPHYT_RS21705 0.33 -2.3 425,633 - BPHYT_RS21705 0.59 -2.1 425,633 - BPHYT_RS21705 0.59 -2.1 425,837 - BPHYT_RS21705 0.70 -0.7 425,950 + BPHYT_RS21705 0.76 -3.4 425,951 - BPHYT_RS21705 0.76 -1.7 426,065 - BPHYT_RS21705 0.82 -4.0 426,594 - +0.4 427,076 - BPHYT_RS21710 0.35 +0.2 427,298 + BPHYT_RS21710 0.50 -0.0 427,330 - BPHYT_RS21710 0.53 -0.4
Or see this region's nucleotide sequence