Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3156 and Shew_3157 are separated by 10 nucleotides Shew_3157 and Shew_3158 overlap by 4 nucleotides Shew_3158 and Shew_3159 are separated by 14 nucleotides
Shew_3156: Shew_3156 - hypothetical protein (RefSeq), at 3,757,647 to 3,758,111
_3156
Shew_3157: Shew_3157 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq), at 3,758,122 to 3,758,814
_3157
Shew_3158: Shew_3158 - polysulphide reductase, NrfD (RefSeq), at 3,758,811 to 3,759,752
_3158
Shew_3159: Shew_3159 - uncharacterized FlgJ-related protein-like (RefSeq), at 3,759,767 to 3,760,828
_3159
Position (kb)
3758
3759
3760 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3757.878 kb on + strand, within Shew_3156 at 3758.040 kb on + strand, within Shew_3156 at 3758.056 kb on - strand, within Shew_3156 at 3758.228 kb on - strand, within Shew_3157 at 3758.416 kb on + strand, within Shew_3157 at 3758.439 kb on - strand, within Shew_3157 at 3758.441 kb on + strand, within Shew_3157 at 3758.441 kb on + strand, within Shew_3157 at 3758.441 kb on + strand, within Shew_3157 at 3758.441 kb on + strand, within Shew_3157 at 3758.441 kb on + strand, within Shew_3157 at 3758.441 kb on + strand, within Shew_3157 at 3758.441 kb on + strand, within Shew_3157 at 3758.441 kb on + strand, within Shew_3157 at 3758.449 kb on - strand, within Shew_3157 at 3758.449 kb on - strand, within Shew_3157 at 3758.449 kb on - strand, within Shew_3157 at 3758.561 kb on + strand, within Shew_3157 at 3758.569 kb on - strand, within Shew_3157 at 3758.631 kb on - strand, within Shew_3157 at 3758.631 kb on + strand, within Shew_3157 at 3758.676 kb on - strand, within Shew_3157 at 3759.383 kb on - strand, within Shew_3158 at 3759.386 kb on + strand, within Shew_3158 at 3759.392 kb on - strand, within Shew_3158 at 3759.595 kb on + strand, within Shew_3158 at 3759.626 kb on - strand, within Shew_3158 at 3759.884 kb on + strand, within Shew_3159 at 3760.016 kb on - strand, within Shew_3159 at 3760.042 kb on - strand, within Shew_3159 at 3760.068 kb on - strand, within Shew_3159 at 3760.096 kb on + strand, within Shew_3159 at 3760.198 kb on + strand, within Shew_3159 at 3760.230 kb on + strand, within Shew_3159 at 3760.334 kb on - strand, within Shew_3159 at 3760.492 kb on + strand, within Shew_3159 at 3760.749 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.075 vol% remove 3,757,878 + Shew_3156 0.50 -0.0 3,758,040 + Shew_3156 0.85 +0.3 3,758,056 - Shew_3156 0.88 +1.0 3,758,228 - Shew_3157 0.15 +0.5 3,758,416 + Shew_3157 0.42 -0.2 3,758,439 - Shew_3157 0.46 +0.3 3,758,441 + Shew_3157 0.46 +0.3 3,758,441 + Shew_3157 0.46 -0.1 3,758,441 + Shew_3157 0.46 -0.8 3,758,441 + Shew_3157 0.46 -0.3 3,758,441 + Shew_3157 0.46 -0.1 3,758,441 + Shew_3157 0.46 +0.0 3,758,441 + Shew_3157 0.46 -1.6 3,758,441 + Shew_3157 0.46 -0.1 3,758,449 - Shew_3157 0.47 +0.3 3,758,449 - Shew_3157 0.47 -1.4 3,758,449 - Shew_3157 0.47 -1.9 3,758,561 + Shew_3157 0.63 +1.3 3,758,569 - Shew_3157 0.65 -0.3 3,758,631 - Shew_3157 0.73 -0.3 3,758,631 + Shew_3157 0.73 -0.6 3,758,676 - Shew_3157 0.80 -1.1 3,759,383 - Shew_3158 0.61 +0.2 3,759,386 + Shew_3158 0.61 -0.2 3,759,392 - Shew_3158 0.62 -0.8 3,759,595 + Shew_3158 0.83 +0.5 3,759,626 - Shew_3158 0.87 +0.2 3,759,884 + Shew_3159 0.11 +0.2 3,760,016 - Shew_3159 0.23 -3.1 3,760,042 - Shew_3159 0.26 -1.1 3,760,068 - Shew_3159 0.28 -0.6 3,760,096 + Shew_3159 0.31 -0.1 3,760,198 + Shew_3159 0.41 +0.4 3,760,230 + Shew_3159 0.44 +0.9 3,760,334 - Shew_3159 0.53 -0.0 3,760,492 + Shew_3159 0.68 +0.5 3,760,749 - +0.3
Or see this region's nucleotide sequence