Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_3101 and Shew_3102 are separated by 294 nucleotides Shew_3102 and Shew_3103 are separated by 263 nucleotides Shew_3103 and Shew_3104 are separated by 13 nucleotides Shew_3104 and Shew_3105 are separated by 1 nucleotides
Shew_3101: Shew_3101 - UspA domain-containing protein (RefSeq), at 3,681,687 to 3,682,118
_3101
Shew_3102: Shew_3102 - hypothetical protein (RefSeq), at 3,682,413 to 3,682,790
_3102
Shew_3103: Shew_3103 - aldehyde dehydrogenase (RefSeq), at 3,683,054 to 3,684,478
_3103
Shew_3104: Shew_3104 - TetR family transcriptional regulator (RefSeq), at 3,684,492 to 3,685,076
_3104
Shew_3105: Shew_3105 - LysR family transcriptional regulator (RefSeq), at 3,685,078 to 3,685,959
_3105
Position (kb)
3683
3684
3685 Strain fitness (log2 ratio)
-1
0
1 at 3682.059 kb on - strand, within Shew_3101 at 3682.059 kb on - strand, within Shew_3101 at 3682.245 kb on - strand at 3682.425 kb on + strand at 3682.512 kb on + strand, within Shew_3102 at 3682.565 kb on + strand, within Shew_3102 at 3682.573 kb on - strand, within Shew_3102 at 3682.573 kb on - strand, within Shew_3102 at 3683.087 kb on + strand at 3683.273 kb on + strand, within Shew_3103 at 3683.376 kb on - strand, within Shew_3103 at 3683.623 kb on - strand, within Shew_3103 at 3683.714 kb on - strand, within Shew_3103 at 3683.714 kb on - strand, within Shew_3103 at 3683.714 kb on - strand, within Shew_3103 at 3683.804 kb on + strand, within Shew_3103 at 3683.909 kb on + strand, within Shew_3103 at 3683.959 kb on + strand, within Shew_3103 at 3683.967 kb on - strand, within Shew_3103 at 3684.077 kb on - strand, within Shew_3103 at 3684.124 kb on - strand, within Shew_3103 at 3684.752 kb on + strand, within Shew_3104 at 3684.757 kb on + strand, within Shew_3104 at 3684.773 kb on - strand, within Shew_3104 at 3684.778 kb on - strand, within Shew_3104 at 3684.778 kb on - strand, within Shew_3104 at 3684.950 kb on + strand, within Shew_3104 at 3684.963 kb on + strand, within Shew_3104 at 3684.964 kb on + strand, within Shew_3104
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.075 vol% remove 3,682,059 - Shew_3101 0.86 +0.8 3,682,059 - Shew_3101 0.86 -0.1 3,682,245 - +0.5 3,682,425 + +0.4 3,682,512 + Shew_3102 0.26 +0.1 3,682,565 + Shew_3102 0.40 +0.0 3,682,573 - Shew_3102 0.42 +0.0 3,682,573 - Shew_3102 0.42 +0.1 3,683,087 + +0.4 3,683,273 + Shew_3103 0.15 +0.4 3,683,376 - Shew_3103 0.23 +1.1 3,683,623 - Shew_3103 0.40 +0.3 3,683,714 - Shew_3103 0.46 -0.0 3,683,714 - Shew_3103 0.46 +0.5 3,683,714 - Shew_3103 0.46 +0.4 3,683,804 + Shew_3103 0.53 -0.5 3,683,909 + Shew_3103 0.60 +0.1 3,683,959 + Shew_3103 0.64 -0.2 3,683,967 - Shew_3103 0.64 +0.7 3,684,077 - Shew_3103 0.72 -0.5 3,684,124 - Shew_3103 0.75 +1.5 3,684,752 + Shew_3104 0.44 +0.6 3,684,757 + Shew_3104 0.45 +0.6 3,684,773 - Shew_3104 0.48 -0.0 3,684,778 - Shew_3104 0.49 -0.0 3,684,778 - Shew_3104 0.49 -1.1 3,684,950 + Shew_3104 0.78 +0.2 3,684,963 + Shew_3104 0.81 -0.0 3,684,964 + Shew_3104 0.81 -0.0
Or see this region's nucleotide sequence