Strain Fitness in Shewanella loihica PV-4 around Shew_2973
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
3,525,640 | - | Shew_2972 | 0.38 | -0.4 | |
3,525,668 | + | Shew_2972 | 0.42 | +0.2 | |
3,525,905 | - | Shew_2972 | 0.72 | +0.3 | |
3,525,945 | + | Shew_2972 | 0.77 | +0.6 | |
3,526,329 | - | -0.4 | |||
3,526,351 | - | +0.1 | |||
3,526,436 | + | -1.5 | |||
3,526,591 | - | Shew_2973 | 0.15 | +0.2 | |
3,526,645 | - | Shew_2973 | 0.18 | +0.6 | |
3,526,645 | - | Shew_2973 | 0.18 | +0.1 | |
3,526,666 | - | Shew_2973 | 0.19 | -0.0 | |
3,526,772 | - | Shew_2973 | 0.24 | +0.2 | |
3,526,971 | + | Shew_2973 | 0.33 | -0.5 | |
3,527,189 | + | Shew_2973 | 0.44 | +0.2 | |
3,527,343 | - | Shew_2973 | 0.51 | +0.4 | |
3,528,329 | + | -1.3 | |||
3,528,940 | + | Shew_2974 | 0.70 | -0.0 | |
3,529,053 | + | -0.5 | |||
3,529,124 | - | -0.1 | |||
3,529,137 | + | -0.8 | |||
3,529,162 | + | +1.5 | |||
3,529,173 | + | +0.2 | |||
3,529,353 | - | +0.0 |
Or see this region's nucleotide sequence