Strain Fitness in Shewanella loihica PV-4 around Shew_2757
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
3,260,781 | - | xni | Shew_2756 | 0.34 | +0.2 |
3,260,870 | + | xni | Shew_2756 | 0.45 | +0.1 |
3,260,870 | + | xni | Shew_2756 | 0.45 | -0.3 |
3,260,878 | - | xni | Shew_2756 | 0.46 | -0.5 |
3,260,971 | + | xni | Shew_2756 | 0.58 | -0.1 |
3,261,129 | + | xni | Shew_2756 | 0.79 | -0.2 |
3,261,624 | - | Shew_2757 | 0.47 | -0.0 | |
3,261,675 | + | Shew_2757 | 0.60 | -1.0 | |
3,261,675 | + | Shew_2757 | 0.60 | +0.2 | |
3,261,836 | + | +0.0 | |||
3,261,852 | + | -2.3 | |||
3,261,860 | - | -0.1 | |||
3,261,864 | + | -0.0 | |||
3,262,491 | + | +1.1 | |||
3,262,558 | + | +0.0 |
Or see this region's nucleotide sequence