Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_2363 and Shew_2364 are separated by 26 nucleotides Shew_2364 and Shew_2365 are separated by 106 nucleotides Shew_2365 and Shew_2366 are separated by 99 nucleotides
Shew_2363: Shew_2363 - proline racemase (RefSeq), at 2,763,929 to 2,764,930
_2363
Shew_2364: Shew_2364 - aldehyde dehydrogenase (RefSeq), at 2,764,957 to 2,766,522
_2364
Shew_2365: Shew_2365 - GntR family transcriptional regulator (RefSeq), at 2,766,629 to 2,767,300
_2365
Shew_2366: Shew_2366 - 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq), at 2,767,400 to 2,768,467
_2366
Position (kb)
2764
2765
2766
2767 Strain fitness (log2 ratio)
-2
-1
0
1 at 2764.270 kb on + strand, within Shew_2363 at 2764.409 kb on - strand, within Shew_2363 at 2764.473 kb on + strand, within Shew_2363 at 2764.547 kb on + strand, within Shew_2363 at 2764.555 kb on - strand, within Shew_2363 at 2764.894 kb on - strand at 2765.047 kb on - strand at 2765.199 kb on + strand, within Shew_2364 at 2765.630 kb on - strand, within Shew_2364 at 2765.868 kb on + strand, within Shew_2364 at 2765.871 kb on - strand, within Shew_2364 at 2765.986 kb on - strand, within Shew_2364 at 2766.051 kb on - strand, within Shew_2364 at 2766.054 kb on + strand, within Shew_2364 at 2766.054 kb on + strand, within Shew_2364 at 2766.290 kb on + strand, within Shew_2364 at 2766.298 kb on - strand, within Shew_2364 at 2766.303 kb on - strand, within Shew_2364 at 2766.504 kb on - strand at 2766.783 kb on + strand, within Shew_2365 at 2767.485 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.075 vol% remove 2,764,270 + Shew_2363 0.34 +0.7 2,764,409 - Shew_2363 0.48 -0.4 2,764,473 + Shew_2363 0.54 +0.6 2,764,547 + Shew_2363 0.62 -0.7 2,764,555 - Shew_2363 0.62 +0.2 2,764,894 - +0.0 2,765,047 - +1.3 2,765,199 + Shew_2364 0.15 -0.5 2,765,630 - Shew_2364 0.43 -1.5 2,765,868 + Shew_2364 0.58 +0.1 2,765,871 - Shew_2364 0.58 +0.8 2,765,986 - Shew_2364 0.66 +0.0 2,766,051 - Shew_2364 0.70 -1.1 2,766,054 + Shew_2364 0.70 -0.6 2,766,054 + Shew_2364 0.70 +0.6 2,766,290 + Shew_2364 0.85 +0.2 2,766,298 - Shew_2364 0.86 -0.3 2,766,303 - Shew_2364 0.86 -2.7 2,766,504 - +1.2 2,766,783 + Shew_2365 0.23 -2.1 2,767,485 + -0.7
Or see this region's nucleotide sequence