Strain Fitness in Shewanella loihica PV-4 around Shew_1783
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,039,251 | - | +1.0 | |||
| 2,039,325 | + | -0.3 | |||
| 2,039,849 | + | Shew_1782 | 0.29 | +0.4 | |
| 2,040,032 | + | Shew_1782 | 0.67 | +0.5 | |
| 2,040,088 | + | Shew_1782 | 0.79 | +0.3 | |
| 2,040,312 | - | Shew_1783 | 0.11 | -1.5 | |
| 2,040,329 | - | Shew_1783 | 0.13 | -1.2 | |
| 2,040,552 | + | Shew_1783 | 0.34 | +0.2 | |
| 2,040,604 | - | Shew_1783 | 0.39 | -0.9 | |
| 2,040,721 | + | Shew_1783 | 0.50 | -0.9 | |
| 2,041,925 | + | Shew_1784 | 0.64 | +0.3 |
Or see this region's nucleotide sequence