Strain Fitness in Shewanella loihica PV-4 around Shew_1706
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
1,958,824 | + | +0.4 | |||
1,958,824 | + | -0.8 | |||
1,958,858 | + | -0.2 | |||
1,958,901 | + | Shew_1704 | 0.17 | +0.9 | |
1,958,901 | + | Shew_1704 | 0.17 | -0.2 | |
1,958,906 | + | Shew_1704 | 0.18 | -0.4 | |
1,958,906 | + | Shew_1704 | 0.18 | +0.7 | |
1,958,914 | - | Shew_1704 | 0.20 | -1.0 | |
1,958,914 | - | Shew_1704 | 0.20 | -2.9 | |
1,958,914 | - | Shew_1704 | 0.20 | +0.2 | |
1,959,082 | - | Shew_1704 | 0.56 | +0.1 | |
1,959,097 | - | Shew_1704 | 0.59 | +0.3 | |
1,959,147 | + | Shew_1704 | 0.70 | +0.1 | |
1,959,148 | - | Shew_1704 | 0.70 | +0.4 | |
1,959,463 | + | Shew_1705 | 0.45 | +0.1 | |
1,959,560 | + | Shew_1705 | 0.72 | -2.2 | |
1,960,036 | + | Shew_1706 | 0.71 | -0.9 | |
1,960,183 | + | +0.4 | |||
1,960,517 | + | +0.2 | |||
1,960,749 | + | Shew_1707 | 0.29 | -0.4 | |
1,960,799 | + | Shew_1707 | 0.34 | -0.4 |
Or see this region's nucleotide sequence