Strain Fitness in Shewanella loihica PV-4 around Shew_1618
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
1,848,615 | - | +0.2 | |||
1,848,644 | - | +0.3 | |||
1,848,954 | - | Shew_1617 | 0.35 | +0.3 | |
1,849,277 | - | Shew_1617 | 0.85 | -2.7 | |
1,850,024 | - | Shew_1618 | 0.66 | -3.4 | |
1,850,074 | + | Shew_1618 | 0.72 | +2.1 | |
1,850,074 | + | Shew_1618 | 0.72 | +0.1 | |
1,850,082 | - | Shew_1618 | 0.73 | +0.2 | |
1,850,273 | + | -0.7 | |||
1,850,273 | + | -0.6 | |||
1,850,281 | - | -0.5 | |||
1,850,281 | - | -0.6 | |||
1,850,320 | + | +0.7 | |||
1,850,373 | + | +0.2 | |||
1,850,381 | - | +0.2 | |||
1,850,743 | - | -0.0 | |||
1,850,911 | + | -0.5 | |||
1,850,973 | + | +1.0 |
Or see this region's nucleotide sequence