Strain Fitness in Shewanella loihica PV-4 around Shew_1537
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
1,764,503 | - | Shew_1536 | 0.20 | -1.6 | |
1,764,805 | + | Shew_1536 | 0.68 | +0.5 | |
1,764,813 | - | Shew_1536 | 0.69 | +1.0 | |
1,765,487 | - | Shew_1537 | 0.12 | -0.8 | |
1,765,717 | - | Shew_1537 | 0.30 | +0.0 | |
1,765,864 | - | Shew_1537 | 0.42 | +1.8 | |
1,766,157 | - | Shew_1537 | 0.64 | -0.6 | |
1,766,316 | + | Shew_1537 | 0.77 | -0.4 | |
1,766,325 | - | Shew_1537 | 0.77 | -0.2 | |
1,766,547 | + | -3.2 | |||
1,766,568 | + | +0.2 | |||
1,766,640 | - | -0.7 | |||
1,766,789 | + | +0.3 | |||
1,767,140 | + | +0.8 | |||
1,767,147 | - | -0.3 | |||
1,767,148 | - | +0.5 | |||
1,767,148 | - | -0.0 | |||
1,767,202 | + | -0.7 | |||
1,767,470 | - | Shew_1539 | 0.38 | +0.2 | |
1,767,480 | - | Shew_1539 | 0.39 | -1.1 |
Or see this region's nucleotide sequence