Strain Fitness in Shewanella loihica PV-4 around Shew_1483
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 1,707,087 | + | Shew_1482 | 0.32 | +0.7 | |
| 1,707,228 | + | Shew_1482 | 0.43 | -0.2 | |
| 1,707,264 | + | Shew_1482 | 0.46 | +0.7 | |
| 1,707,363 | - | Shew_1482 | 0.54 | -0.3 | |
| 1,707,363 | - | Shew_1482 | 0.54 | -0.5 | |
| 1,707,487 | - | Shew_1482 | 0.64 | -2.7 | |
| 1,708,093 | + | Shew_1483 | 0.19 | +1.7 | |
| 1,708,216 | - | Shew_1483 | 0.35 | +1.9 | |
| 1,708,523 | - | Shew_1483 | 0.73 | +0.6 | |
| 1,708,938 | + | +1.2 | |||
| 1,708,967 | - | -0.8 | |||
| 1,709,076 | + | Shew_1484 | 0.17 | +0.4 | |
| 1,709,080 | - | Shew_1484 | 0.18 | -0.3 | |
| 1,709,403 | + | Shew_1484 | 0.43 | -0.7 |
Or see this region's nucleotide sequence