Strain Fitness in Shewanella loihica PV-4 around Shew_1368
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
1,577,172 | + | fliG | Shew_1367 | 0.42 | -0.4 |
1,577,180 | - | fliG | Shew_1367 | 0.43 | -0.1 |
1,577,804 | + | +0.2 | |||
1,577,956 | + | Shew_1368 | 0.18 | -0.5 | |
1,577,981 | + | Shew_1368 | 0.20 | -0.3 | |
1,578,043 | - | Shew_1368 | 0.27 | -2.3 | |
1,578,061 | + | Shew_1368 | 0.28 | -0.3 | |
1,578,565 | + | Shew_1368 | 0.78 | -0.1 | |
1,578,565 | + | Shew_1368 | 0.78 | -2.0 | |
1,578,920 | - | fliI | Shew_1369 | 0.12 | -0.1 |
1,579,284 | + | fliI | Shew_1369 | 0.39 | +0.2 |
1,579,292 | - | fliI | Shew_1369 | 0.39 | -0.9 |
Or see this region's nucleotide sequence