Strain Fitness in Shewanella loihica PV-4 around Shew_1274
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
1,470,293 | - | Shew_1272 | 0.29 | +0.6 | |
1,470,642 | + | Shew_1272 | 0.72 | +0.0 | |
1,470,890 | + | -0.5 | |||
1,471,114 | + | Shew_1273 | 0.73 | -0.6 | |
1,471,378 | + | Shew_1274 | 0.11 | +0.7 | |
1,471,446 | - | Shew_1274 | 0.14 | -0.4 | |
1,471,862 | + | Shew_1274 | 0.38 | -1.6 | |
1,471,945 | - | Shew_1274 | 0.42 | -0.1 | |
1,472,164 | + | Shew_1274 | 0.55 | +1.1 | |
1,472,279 | + | Shew_1274 | 0.61 | +0.0 | |
1,472,287 | - | Shew_1274 | 0.62 | -2.3 | |
1,472,480 | - | Shew_1274 | 0.73 | +3.4 | |
1,472,855 | - | -4.1 | |||
1,472,892 | + | -0.3 | |||
1,472,893 | - | -0.2 | |||
1,473,022 | - | +0.4 | |||
1,473,217 | + | +1.0 | |||
1,473,305 | + | +0.7 | |||
1,473,327 | + | +0.4 | |||
1,473,335 | - | +0.4 | |||
1,473,402 | + | +0.5 | |||
1,473,410 | - | -0.4 |
Or see this region's nucleotide sequence