Strain Fitness in Shewanella loihica PV-4 around Shew_1150
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
1,323,622 | + | -0.6 | |||
1,323,901 | + | Shew_1149 | 0.40 | +0.1 | |
1,323,909 | - | Shew_1149 | 0.41 | +0.1 | |
1,324,564 | + | Shew_1150 | 0.13 | +1.5 | |
1,324,570 | - | Shew_1150 | 0.14 | -3.5 | |
1,324,572 | - | Shew_1150 | 0.15 | +1.2 | |
1,324,648 | - | Shew_1150 | 0.33 | -0.0 | |
1,324,768 | + | Shew_1150 | 0.61 | +1.2 | |
1,324,925 | + | +1.0 | |||
1,325,090 | + | -2.1 | |||
1,325,105 | + | -0.2 | |||
1,325,229 | + | Shew_1151 | 0.11 | +0.4 | |
1,325,318 | + | Shew_1151 | 0.24 | +0.2 | |
1,325,463 | + | Shew_1151 | 0.45 | +0.7 | |
1,325,495 | + | Shew_1151 | 0.49 | -0.1 | |
1,325,571 | - | Shew_1151 | 0.60 | -0.3 |
Or see this region's nucleotide sequence