Strain Fitness in Shewanella loihica PV-4 around Shew_1114
Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.075 vol% |
---|---|---|---|---|---|
remove | |||||
1,285,072 | + | Shew_1113 | 0.54 | +1.3 | |
1,285,257 | + | Shew_1113 | 0.66 | -0.5 | |
1,285,338 | + | Shew_1113 | 0.71 | +0.4 | |
1,285,359 | + | Shew_1113 | 0.72 | +1.4 | |
1,285,471 | - | Shew_1113 | 0.80 | -0.5 | |
1,285,567 | + | Shew_1113 | 0.86 | +0.1 | |
1,286,247 | + | Shew_1114 | 0.52 | -0.2 | |
1,286,604 | - | +1.0 | |||
1,287,007 | - | +0.2 | |||
1,287,168 | - | +0.7 | |||
1,287,274 | + | +0.2 | |||
1,287,395 | + | -1.7 | |||
1,287,397 | + | +0.9 | |||
1,287,397 | + | -0.3 | |||
1,287,402 | + | -0.1 | |||
1,287,405 | - | -0.3 | |||
1,287,410 | - | +1.0 |
Or see this region's nucleotide sequence