Experiment: Furfuryl Alcohol 0.075 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0349 and Shew_0350 are separated by 66 nucleotides Shew_0350 and Shew_0351 are separated by 28 nucleotides Shew_0351 and Shew_0352 are separated by 117 nucleotides Shew_0352 and Shew_0353 are separated by 2 nucleotides
Shew_0349: Shew_0349 - rhodanese domain-containing protein (RefSeq), at 398,930 to 399,355
_0349
Shew_0350: Shew_0350 - peptidylprolyl isomerase, FKBP-type (RefSeq), at 399,422 to 400,225
_0350
Shew_0351: Shew_0351 - TPR repeat-containing protein (RefSeq), at 400,254 to 400,946
_0351
Shew_0352: Shew_0352 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq), at 401,064 to 401,711
_0352
Shew_0353: Shew_0353 - polysulphide reductase, NrfD (RefSeq), at 401,714 to 402,661
_0353
Position (kb) 400
401 Strain fitness (log2 ratio) -1
0
1 at 399.272 kb on + strand, within Shew_0349 at 399.484 kb on - strand at 399.485 kb on - strand at 399.485 kb on - strand at 399.485 kb on - strand at 399.490 kb on - strand at 399.495 kb on - strand at 399.630 kb on - strand, within Shew_0350 at 399.669 kb on - strand, within Shew_0350 at 399.766 kb on - strand, within Shew_0350 at 399.884 kb on - strand, within Shew_0350 at 399.891 kb on + strand, within Shew_0350 at 399.899 kb on - strand, within Shew_0350 at 399.899 kb on - strand, within Shew_0350 at 399.923 kb on - strand, within Shew_0350 at 399.959 kb on - strand, within Shew_0350 at 400.107 kb on - strand, within Shew_0350 at 400.146 kb on - strand at 400.284 kb on + strand at 400.381 kb on + strand, within Shew_0351 at 400.545 kb on + strand, within Shew_0351 at 400.553 kb on - strand, within Shew_0351 at 400.553 kb on - strand, within Shew_0351 at 400.553 kb on - strand, within Shew_0351 at 400.564 kb on + strand, within Shew_0351 at 400.564 kb on + strand, within Shew_0351 at 400.572 kb on - strand, within Shew_0351 at 400.574 kb on + strand, within Shew_0351 at 400.855 kb on - strand, within Shew_0351 at 400.900 kb on + strand at 400.903 kb on - strand at 400.905 kb on + strand at 400.941 kb on + strand at 401.073 kb on + strand at 401.133 kb on - strand, within Shew_0352 at 401.237 kb on - strand, within Shew_0352 at 401.538 kb on - strand, within Shew_0352 at 401.550 kb on + strand, within Shew_0352 at 401.653 kb on - strand at 401.686 kb on - strand at 401.880 kb on - strand, within Shew_0353 at 401.943 kb on - strand, within Shew_0353
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.075 vol% remove 399,272 + Shew_0349 0.80 +0.2 399,484 - +0.1 399,485 - -0.4 399,485 - -0.4 399,485 - -0.3 399,490 - +0.6 399,495 - -0.5 399,630 - Shew_0350 0.26 -0.3 399,669 - Shew_0350 0.31 +0.5 399,766 - Shew_0350 0.43 -0.4 399,884 - Shew_0350 0.57 +0.4 399,891 + Shew_0350 0.58 +0.4 399,899 - Shew_0350 0.59 +0.2 399,899 - Shew_0350 0.59 +0.2 399,923 - Shew_0350 0.62 -0.2 399,959 - Shew_0350 0.67 +0.0 400,107 - Shew_0350 0.85 -0.0 400,146 - -0.1 400,284 + -0.0 400,381 + Shew_0351 0.18 -0.3 400,545 + Shew_0351 0.42 +0.3 400,553 - Shew_0351 0.43 -1.0 400,553 - Shew_0351 0.43 -0.2 400,553 - Shew_0351 0.43 -0.3 400,564 + Shew_0351 0.45 +0.3 400,564 + Shew_0351 0.45 +0.2 400,572 - Shew_0351 0.46 -0.2 400,574 + Shew_0351 0.46 -0.3 400,855 - Shew_0351 0.87 +0.1 400,900 + +0.1 400,903 - -1.6 400,905 + +0.0 400,941 + -1.0 401,073 + -0.6 401,133 - Shew_0352 0.11 +0.7 401,237 - Shew_0352 0.27 +0.8 401,538 - Shew_0352 0.73 -0.8 401,550 + Shew_0352 0.75 -1.5 401,653 - +0.1 401,686 - +0.5 401,880 - Shew_0353 0.18 +0.1 401,943 - Shew_0353 0.24 +0.5
Or see this region's nucleotide sequence